RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 LOC102724159A0A0B4J2E5 919 aa27.47■■□□□ 1.99
TTC3-217ENST00000481605 ARVCFO00192 962 aa27.47■■□□□ 1.99
TTC3-217ENST00000481605 RPS6P62753 249 aaKnown RBP27.47■■□□□ 1.99
TTC3-217ENST00000481605 PWP2Q15269 919 aaKnown RBP27.47■■□□□ 1.99
TTC3-217ENST00000481605 FSCN1Q16658 493 aaKnown RBP27.47■■□□□ 1.99
TTC3-217ENST00000481605 TMEM63BQ5T3F8 832 aa27.47■■□□□ 1.99
TTC3-217ENST00000481605 RUFY2Q8WXA3 655 aa27.47■■□□□ 1.99
TTC3-217ENST00000481605 CHMLP26374 656 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 ASPRV1Q53RT3 343 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 CDC37Q16543 378 aaPredicted RBP27.46■■□□□ 1.99
TTC3-217ENST00000481605 CXCL17Q6UXB2 119 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 ADGRF4Q8IZF3 695 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 MTMR10Q9NXD2 777 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 Q9Y3F1 56 aa27.46■■□□□ 1.99
TTC3-217ENST00000481605 IFIT1BQ5T764 474 aaKnown RBP27.45■■□□□ 1.98
TTC3-217ENST00000481605 TBX21Q9UL17 535 aa27.45■■□□□ 1.98
TTC3-217ENST00000481605 PARP1P09874 1014 aaKnown RBP27.44■■□□□ 1.98
TTC3-217ENST00000481605 EPHB4P54760 987 aa27.44■■□□□ 1.98
TTC3-217ENST00000481605 FPGSQ05932 587 aa27.44■■□□□ 1.98
TTC3-217ENST00000481605 ZEB2O60315 1214 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 CABYRO75952 493 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 TIMP1P01033 207 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 PTH1RQ03431 593 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 DUSP28Q4G0W2 176 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 CYB5R4Q7L1T6 521 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 FAM126BQ8IXS8 530 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 DNERQ8NFT8 737 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 WDR11Q9BZH6 1224 aa27.43■■□□□ 1.98
TTC3-217ENST00000481605 PDE4DQ08499 809 aa27.42■■□□□ 1.98
TTC3-217ENST00000481605 TRDNQ13061 729 aa27.42■■□□□ 1.98
TTC3-217ENST00000481605 RGS22Q8NE09 1264 aa27.42■■□□□ 1.98
TTC3-217ENST00000481605 MPHOSPH6Q99547 160 aaKnown RBP27.42■■□□□ 1.98
TTC3-217ENST00000481605 U3KPZ7 1027 aaPredicted RBP27.42■■□□□ 1.98
TTC3-217ENST00000481605 DHX16O60231 1041 aaKnown RBP27.41■■□□□ 1.98
TTC3-217ENST00000481605 CYP21A2P08686 494 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 SEC23AQ15436 765 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 FAM109BQ6ICB4 259 aaPredicted RBP27.41■■□□□ 1.98
TTC3-217ENST00000481605 VAT1LQ9HCJ6 419 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 TLR3O15455 904 aaKnown RBP27.41■■□□□ 1.98
TTC3-217ENST00000481605 EDNRBP24530 442 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 ITGA7Q13683 1181 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 QRICH1Q2TAL8 776 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 JMJD4Q9H9V9 463 aa27.41■■□□□ 1.98
TTC3-217ENST00000481605 ABCB11O95342 1321 aa27.4■■□□□ 1.98
TTC3-217ENST00000481605 RBM47A0AV96 593 aaKnown RBP27.4■■□□□ 1.98
TTC3-217ENST00000481605 STAG2Q8N3U4 1231 aa27.4■■□□□ 1.98
TTC3-217ENST00000481605 SLC43A3Q8NBI5 491 aa27.4■■□□□ 1.98
TTC3-217ENST00000481605 RNPC3Q96LT9 517 aaKnown RBP27.4■■□□□ 1.98
TTC3-217ENST00000481605 SGSM2O43147 1006 aa27.39■■□□□ 1.98
TTC3-217ENST00000481605 MFSD5Q6N075 450 aa27.39■■□□□ 1.98
TTC3-217ENST00000481605 TBC1D5Q92609 795 aa27.39■■□□□ 1.98
TTC3-217ENST00000481605 GRIN2DO15399 1336 aa27.39■■□□□ 1.97
TTC3-217ENST00000481605 B4DLN1 442 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 CD4P01730 458 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 MRPL12P52815 198 aaKnown RBP27.38■■□□□ 1.97
TTC3-217ENST00000481605 FBXO11Q86XK2 927 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 FAM161BQ96MY7 647 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 PPP1R12CQ9BZL4 782 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 MAF1Q9H063 256 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 STXBP5LQ9Y2K9 1186 aa27.38■■□□□ 1.97
TTC3-217ENST00000481605 PSMC6P62333 389 aa27.37■■□□□ 1.97
TTC3-217ENST00000481605 MRPL11Q9Y3B7 192 aaKnown RBP27.37■■□□□ 1.97
TTC3-217ENST00000481605 TAF6LQ9Y6J9 622 aa27.37■■□□□ 1.97
TTC3-217ENST00000481605 KLRF2D3W0D1 207 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 SMAD3P84022 425 aaKnown RBP27.36■■□□□ 1.97
TTC3-217ENST00000481605 PPP2R5BQ15173 497 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 ZNF697Q5TEC3 545 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 MCF2L2Q86YR7 1114 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 OR6J1Q8NGC5 347 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 SCFD2Q8WU76 684 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 CPT1AP50416 773 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 RALYLQ86SE5 291 aaKnown RBP27.36■■□□□ 1.97
TTC3-217ENST00000481605 SYTL5Q8TDW5 730 aaPredicted RBP27.36■■□□□ 1.97
TTC3-217ENST00000481605 TAAR1Q96RJ0 339 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 SEZ6LQ9BYH1 1024 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 COL20A1Q9P218 1284 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 MAD2L2Q9UI95 211 aa27.36■■□□□ 1.97
TTC3-217ENST00000481605 E7EWF7 191 aa27.35■■□□□ 1.97
TTC3-217ENST00000481605 IFIT3O14879 490 aaKnown RBP27.35■■□□□ 1.97
TTC3-217ENST00000481605 NKRFO15226 690 aaKnown RBP eCLIP27.35■■□□□ 1.976e-8■■■□□ 18.1
TTC3-217ENST00000481605 PPIGQ13427 754 aaKnown RBP eCLIP27.35■■□□□ 1.977e-7■□□□□ 10
TTC3-217ENST00000481605 TMEM199Q8N511 208 aa27.35■■□□□ 1.97
TTC3-217ENST00000481605 POLR3EQ9NVU0 708 aa27.35■■□□□ 1.97
TTC3-217ENST00000481605 ERICH2A1L162 156 aa27.34■■□□□ 1.97
TTC3-217ENST00000481605 CSF2RAP15509 400 aa27.34■■□□□ 1.97
TTC3-217ENST00000481605 NCOA7Q8NI08 942 aa27.34■■□□□ 1.97
TTC3-217ENST00000481605 GUCD1Q96NT3 240 aa27.34■■□□□ 1.97
TTC3-217ENST00000481605 AMNQ9BXJ7 453 aa27.34■■□□□ 1.97
TTC3-217ENST00000481605 PALM3A6NDB9 673 aaPredicted RBP27.33■■□□□ 1.97
TTC3-217ENST00000481605 B4GALT4O60513 344 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 MYL3P08590 195 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 TXNP10599 105 aaKnown RBP27.33■■□□□ 1.97
TTC3-217ENST00000481605 PURAQ00577 322 aaKnown RBP27.33■■□□□ 1.97
TTC3-217ENST00000481605 SLC17A8Q8NDX2 589 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 NSUN6Q8TEA1 469 aaKnown RBP27.33■■□□□ 1.97
TTC3-217ENST00000481605 COPS5Q92905 334 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 MAP4K1Q92918 833 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.33■■□□□ 1.973e-8■■□□□ 11.5
TTC3-217ENST00000481605 TRPV6Q9H1D0 765 aa27.33■■□□□ 1.97
TTC3-217ENST00000481605 CYP2C18P33260 490 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms