RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 PURAQ00577 322 aaKnown RBP15.9■□□□□ 0.14
NDC1-202ENST00000480952 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
NDC1-202ENST00000480952 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
NDC1-202ENST00000480952 NSMFQ6X4W1 530 aa15.9■□□□□ 0.14
NDC1-202ENST00000480952 SIRT2Q8IXJ6 389 aa15.9■□□□□ 0.14
NDC1-202ENST00000480952 MTG1Q9BT17 334 aaPredicted RBP15.9■□□□□ 0.14
NDC1-202ENST00000480952 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
NDC1-202ENST00000480952 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 ARHGEF15O94989 841 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 IQCF3P0C7M6 154 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
NDC1-202ENST00000480952 NEDD1Q8NHV4 660 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 GMCL1Q96IK5 515 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 PURBQ96QR8 312 aaKnown RBP15.89■□□□□ 0.13
NDC1-202ENST00000480952 WDR11Q9BZH6 1224 aa15.89■□□□□ 0.13
NDC1-202ENST00000480952 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 GNAT2P19087 354 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 KCNJ6P48051 423 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 TFAP4Q01664 338 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 PDE4BQ07343 736 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 BFSP2Q13515 415 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 NBPF20Q3BBV1 942 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 ALYREFQ86V81 257 aaKnown RBP15.88■□□□□ 0.13
NDC1-202ENST00000480952 OR6J1Q8NGC5 347 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 EPB41L4AQ9HCS5 686 aaPredicted RBP15.88■□□□□ 0.13
NDC1-202ENST00000480952 ADD3Q9UEY8 706 aaKnown RBP15.88■□□□□ 0.13
NDC1-202ENST00000480952 CCPG1Q9ULG6 757 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 NOD1Q9Y239 953 aa15.88■□□□□ 0.13
NDC1-202ENST00000480952 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
NDC1-202ENST00000480952 LPXNO60711 386 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 PLA2G6O60733 806 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 BAIAP3O94812 1187 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 RCSD1Q6JBY9 416 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 KCTD1Q719H9 257 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 APPBP2Q92624 585 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 ZBED2Q9BTP6 218 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 CD320Q9NPF0 282 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 PRR12Q9ULL5 1215 aa15.87■□□□□ 0.13
NDC1-202ENST00000480952 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
NDC1-202ENST00000480952 RNF113AO15541 343 aaKnown RBP15.86■□□□□ 0.13
NDC1-202ENST00000480952 GPAA1O43292 621 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
NDC1-202ENST00000480952 MS4A1P11836 297 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 BAATQ14032 418 aaPredicted RBP15.86■□□□□ 0.13
NDC1-202ENST00000480952 IFNL3Q8IZI9 196 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 PPP1R13LQ8WUF5 828 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 NACAP1Q9BZK3 213 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 LMCD1Q9NZU5 365 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 RAD50Q92878 1312 aa15.86■□□□□ 0.13
NDC1-202ENST00000480952 KPNA6O60684 536 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 ALDH5A1P51649 535 aaPredicted RBP15.85■□□□□ 0.13
NDC1-202ENST00000480952 CHMP4BP1P59074 171 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 PTPN11Q06124 597 aaPredicted RBP15.85■□□□□ 0.13
NDC1-202ENST00000480952 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 SPRED2Q7Z698 418 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 KBTBD3Q8NAB2 608 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 GDPD5Q8WTR4 605 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 LRRCC1Q9C099 1032 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 ZBTB40Q9NUA8 1239 aa15.85■□□□□ 0.13
NDC1-202ENST00000480952 RBM47A0AV96 593 aaKnown RBP15.84■□□□□ 0.13
NDC1-202ENST00000480952 LCHNA4D1U4 455 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 PRR33A8MZF0 331 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
NDC1-202ENST00000480952 ICAM1P05362 532 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
NDC1-202ENST00000480952 GJD3Q8N144 294 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 LRRC37A2A6NM11 1700 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 PLIN4Q96Q06 1357 aa15.84■□□□□ 0.13
NDC1-202ENST00000480952 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 PTPDC1A2A3K4 754 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 M0R2C6 588 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 NKRFO15226 690 aaKnown RBP eCLIP15.83■□□□□ 0.12
NDC1-202ENST00000480952 SSTR3P32745 418 aaPredicted RBP15.83■□□□□ 0.12
NDC1-202ENST00000480952 PPP2R5BQ15173 497 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.12
NDC1-202ENST00000480952 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.12
NDC1-202ENST00000480952 TMCO2Q7Z6W1 182 aaPredicted RBP15.83■□□□□ 0.12
NDC1-202ENST00000480952 CCDC155Q8N6L0 562 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 UBE2ZQ9H832 354 aaPredicted RBP15.83■□□□□ 0.12
NDC1-202ENST00000480952 MTUS1Q9ULD2 1270 aa15.83■□□□□ 0.12
NDC1-202ENST00000480952 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 PIEZO1Q92508 2521 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 A6NJR5 290 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 CALML3P27482 149 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 WDR5P61964 334 aaKnown RBP15.82■□□□□ 0.12
NDC1-202ENST00000480952 PPARAQ07869 468 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 PDE4DQ08499 809 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 PTGISQ16647 500 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
NDC1-202ENST00000480952 CCDC96Q2M329 555 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms