RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TNFAIP2Q03169 654 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 RNF20Q5VTR2 975 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 IQSEC1Q6DN90 963 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 TAPT1Q6NXT6 567 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 MCF2L2Q86YR7 1114 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 FBXO16Q8IX29 292 aaPredicted RBP19.79■□□□□ 0.76
HSPG2-209ENST00000480900 PCSK9Q8NBP7 692 aaKnown RBP19.79■□□□□ 0.76
HSPG2-209ENST00000480900 TMEM87BQ96K49 555 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 MPHOSPH6Q99547 160 aaKnown RBP19.79■□□□□ 0.76
HSPG2-209ENST00000480900 AMNQ9BXJ7 453 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 GNEQ9Y223 722 aaKnown RBP19.79■□□□□ 0.76
HSPG2-209ENST00000480900 ATP11BQ9Y2G3 1177 aa19.79■□□□□ 0.76
HSPG2-209ENST00000480900 MRPL11Q9Y3B7 192 aaKnown RBP19.79■□□□□ 0.76
HSPG2-209ENST00000480900 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.78■□□□□ 0.76
HSPG2-209ENST00000480900 MYADML2A6NDP7 307 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 B4DLN1 442 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 ZBTB5O15062 677 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 BMP8BP34820 402 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 MAGEA10P43363 369 aaPredicted RBP19.78■□□□□ 0.76
HSPG2-209ENST00000480900 MRPL12P52815 198 aaKnown RBP19.78■□□□□ 0.76
HSPG2-209ENST00000480900 KCNA10Q16322 511 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 TRIM60Q495X7 471 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 EEPD1Q7L9B9 569 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 NUP133Q8WUM0 1156 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 MAP3K14Q99558 947 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 RIOX1Q9H6W3 641 aa19.78■□□□□ 0.76
HSPG2-209ENST00000480900 DDAH1O94760 285 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 EDNRBP24530 442 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 FXR1P51114 621 aaKnown RBP eCLIP19.77■□□□□ 0.76
HSPG2-209ENST00000480900 SLC35G1Q2M3R5 365 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 NOL8Q76FK4 1167 aaKnown RBP19.77■□□□□ 0.76
HSPG2-209ENST00000480900 TLK2Q86UE8 772 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 ZNF654Q8IZM8 581 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 TMTC2Q8N394 836 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 PDGFCQ9NRA1 345 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 Q9Y3F1 56 aa19.77■□□□□ 0.76
HSPG2-209ENST00000480900 SH2B2O14492 632 aaPredicted RBP19.76■□□□□ 0.75
HSPG2-209ENST00000480900 CTAGE5O15320 804 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 SMPD1P17405 629 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 PDE4DQ08499 809 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 TRAF1Q13077 416 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 GNASQ5JWF2 1037 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 GPHNQ9NQX3 736 aaPredicted RBP19.76■□□□□ 0.75
HSPG2-209ENST00000480900 STARD7Q9NQZ5 370 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 PRKAG2Q9UGJ0 569 aa19.76■□□□□ 0.75
HSPG2-209ENST00000480900 RBM47A0AV96 593 aaKnown RBP19.75■□□□□ 0.75
HSPG2-209ENST00000480900 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
HSPG2-209ENST00000480900 KIF5BP33176 963 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 LIFRP42702 1097 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 IRX5P78411 483 aaPredicted RBP19.75■□□□□ 0.75
HSPG2-209ENST00000480900 GHRHRQ02643 423 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 CTCFLQ8NI51 663 aaPredicted RBP19.75■□□□□ 0.75
HSPG2-209ENST00000480900 SYTL5Q8TDW5 730 aaPredicted RBP19.75■□□□□ 0.75
HSPG2-209ENST00000480900 TBC1D5Q92609 795 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 GLT1D1Q96MS3 346 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 AP5M1Q9H0R1 490 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 PCDHA1Q9Y5I3 950 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 ELP1O95163 1332 aa19.75■□□□□ 0.75
HSPG2-209ENST00000480900 CYTH3O43739 400 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 ASGR1P07306 291 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 TLE2Q04725 743 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
HSPG2-209ENST00000480900 FSCN1Q16658 493 aaKnown RBP19.74■□□□□ 0.75
HSPG2-209ENST00000480900 DUSP28Q4G0W2 176 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 NFXL1Q6ZNB6 911 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 HOMER1Q86YM7 354 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 SAMD3Q8N6K7 520 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 NSUN6Q8TEA1 469 aaKnown RBP19.74■□□□□ 0.75
HSPG2-209ENST00000480900 PIGSQ96S52 555 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 WDR11Q9BZH6 1224 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 PDLIM7Q9NR12 457 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 MAP3K20Q9NYL2 800 aaKnown RBP19.74■□□□□ 0.75
HSPG2-209ENST00000480900 MYH7BA7E2Y1 1941 aa19.74■□□□□ 0.75
HSPG2-209ENST00000480900 PNMA6FA0A0J9YX94 578 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 OPLAHO14841 1288 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 HSD17B4P51659 736 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 ANKRD33Q7Z3H0 272 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 SCFD2Q8WU76 684 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 TOX2Q96NM4 488 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 TAAR1Q96RJ0 339 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 LBHD1Q9BQE6 289 aaPredicted RBP19.73■□□□□ 0.75
HSPG2-209ENST00000480900 MYL10Q9BUA6 226 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 SPZ1Q9BXG8 430 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 UBE2OQ9C0C9 1292 aaKnown RBP19.73■□□□□ 0.75
HSPG2-209ENST00000480900 COL20A1Q9P218 1284 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 LAMA3Q16787 3333 aa19.73■□□□□ 0.75
HSPG2-209ENST00000480900 SCN10AQ9Y5Y9 1956 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 DYNC1LI2O43237 492 aaPredicted RBP19.72■□□□□ 0.75
HSPG2-209ENST00000480900 ZEB2O60315 1214 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 CFBP00751 764 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 CALM1P0DP23 149 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 CALM2P0DP24 149 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 CALM3P0DP25 149 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 GNAQP50148 359 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 MDM2Q00987 491 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms