RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 TMEM63BQ5T3F8 832 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 IFIT1BQ5T764 474 aaKnown RBP9.44□□□□□ -0.9
CTPS1-209ENST00000480420 TICAM2Q86XR7 235 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 KLHDC9Q8NEP7 349 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 PPP1R13LQ8WUF5 828 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 PIBF1Q8WXW3 757 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
CTPS1-209ENST00000480420 TNKSO95271 1327 aa9.44□□□□□ -0.9
CTPS1-209ENST00000480420 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 MROH7Q68CQ1 1323 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ERICH2A1L162 156 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ARVCFO00192 962 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 GSPT1P15170 499 aaKnown RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ITGB8P26012 769 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 GJA9P57773 515 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 RPS6P62753 249 aaKnown RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 SNX17Q15036 470 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ZNF697Q5TEC3 545 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 IQSEC1Q6DN90 963 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 BTNL9Q6UXG8 535 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 SEPT14Q6ZU15 432 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 CHST3Q7LGC8 479 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ADGRF4Q8IZF3 695 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 WDR11Q9BZH6 1224 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
CTPS1-209ENST00000480420 BAZ2BQ9UIF8 2168 aaKnown RBP9.43□□□□□ -0.9
CTPS1-209ENST00000480420 LRRC37A2A6NM11 1700 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 ASTN1O14525 1302 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 ELP1O95163 1332 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 B4DLN1 442 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 IFIT3O14879 490 aaKnown RBP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 KIAA0355O15063 1070 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 SORBS3O60504 671 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 CFBP00751 764 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 ACRP10323 421 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 CYP2C18P33260 490 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 MRPL12P52815 198 aaKnown RBP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 EPHB4P54760 987 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 PTH1RQ03431 593 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 ITGA7Q13683 1181 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 BRDTQ58F21 947 aaPredicted RBP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 TAPT1Q6NXT6 567 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 HOMER1Q86YM7 354 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 TBC1D5Q92609 795 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 KATNBL1Q9H079 304 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 UPF3AQ9H1J1 476 aaKnown RBP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 IL25Q9H293 177 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 VTA1Q9NP79 307 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 PNMA2Q9UL42 364 aa9.42□□□□□ -0.9
CTPS1-209ENST00000480420 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
CTPS1-209ENST00000480420 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 TIMP1P01033 207 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 TXNP10599 105 aaKnown RBP9.41□□□□□ -0.9
CTPS1-209ENST00000480420 MYCLP12524 364 aaPredicted RBP9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CSF2RAP15509 400 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CHMLP26374 656 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 NOVP48745 357 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CCL23P55773 120 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 QRICH1Q2TAL8 776 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 ARHGEF16Q5VV41 709 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CYB5R4Q7L1T6 521 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 ANKRD33Q7Z3H0 272 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 STAG2Q8N3U4 1231 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 TMEM199Q8N511 208 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 CLEC4DQ8WXI8 215 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 COPS5Q92905 334 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 TOX2Q96NM4 488 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
CTPS1-209ENST00000480420 MRPL11Q9Y3B7 192 aaKnown RBP9.41□□□□□ -0.9
CTPS1-209ENST00000480420 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
CTPS1-209ENST00000480420 PRUNE2Q8WUY3 3088 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 ABCB11O95342 1321 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 RAD50Q92878 1312 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 KLRF2D3W0D1 207 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 CTAGE5O15320 804 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
CTPS1-209ENST00000480420 CST5P28325 142 aaPredicted RBP9.4□□□□□ -0.9
CTPS1-209ENST00000480420 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■□□□□ 9.7
CTPS1-209ENST00000480420 WTAPQ15007 396 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.9
CTPS1-209ENST00000480420 DUSP28Q4G0W2 176 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 TMEM67Q5HYA8 995 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 NFXL1Q6ZNB6 911 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
CTPS1-209ENST00000480420 SCFD2Q8WU76 684 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms