RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 E7EVH7 732 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 DNM1LO00429 736 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 PES1O00541 588 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 CAND2O75155 1236 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 NR1D1P20393 614 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 MDH1P40925 334 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 PRPHP41219 470 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 XRCC4Q13426 336 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 ANKRD20A8PQ5CZ79 823 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 METTL24Q5JXM2 366 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 TAX1BP1Q86VP1 789 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 TAF1P21675 1872 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 BUB1BO60566 1050 aaPredicted RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 APBA1Q02410 837 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 TFCP2Q12800 502 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 SPATA1Q5VX52 437 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 MMGT1Q8N4V1 131 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 NSMCE1Q8WV22 266 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 CYFIP2Q96F07 1278 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 SLC39A2Q9NP94 309 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 DLEC1Q9Y238 1755 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 E7EWF7 191 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 NDUFA10O95299 355 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 PDCD2Q16342 344 aaPredicted RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 BZW1Q7L1Q6 419 aaKnown RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 CAVIN3Q969G5 261 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 SPAG5Q96R06 1193 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 EBF2Q9HAK2 575 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 POLD4Q9HCU8 107 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 REXO2Q9Y3B8 237 aaKnown RBP12.06□□□□□ -0.48
CHD6-208ENST00000480022 OPLAHO14841 1288 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 GPSM2P81274 684 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 CCDC122Q5T0U0 273 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 NOD2Q9HC29 1040 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 BCS1LQ9Y276 419 aa12.06□□□□□ -0.48
CHD6-208ENST00000480022 ATP6V1G2O95670 118 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 KRT14P02533 472 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SCTRP47872 440 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 RAB27AP51159 221 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 ARMCX6Q7L4S7 300 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 C3orf20Q8ND61 904 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
CHD6-208ENST00000480022 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
CHD6-208ENST00000480022 ANO9A1A5B4 782 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 WTIPA6NIX2 430 aaPredicted RBP12.05□□□□□ -0.48
CHD6-208ENST00000480022 SNAP23O00161 211 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 CPLX1O14810 134 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SEMA3EO15041 775 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 ZNF185O15231 689 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 PDE8BO95263 885 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 MYO1EQ12965 1108 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 TRIM14Q14142 442 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SLMAPQ14BN4 828 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SLC5A9Q2M3M2 681 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 MIS18BP1Q6P0N0 1132 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 CUL5Q93034 780 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 MAP3K14Q99558 947 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 ANKRD2Q9GZV1 360 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
CHD6-208ENST00000480022 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 SNX1Q13596 522 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 LACTB2Q53H82 288 aaPredicted RBP12.04□□□□□ -0.48
CHD6-208ENST00000480022 CFAP58Q5T655 872 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 CDKAL1Q5VV42 579 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 HDAC7Q8WUI4 952 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 STAMBPL1Q96FJ0 436 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
CHD6-208ENST00000480022 BAIAP2L1Q9UHR4 511 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 XDHP47989 1333 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 DNAJC8O75937 253 aaPredicted RBP12.04□□□□□ -0.48
CHD6-208ENST00000480022 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHD6-208ENST00000480022 CHGBP05060 677 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 KRT9P35527 623 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms