RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 SYNPO2Q9UMS6 1093 aa20.67■□□□□ 0.9
HMGN1-212ENST00000479586 LCHNA4D1U4 455 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 IQCF3P0C7M6 154 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 IKQ13123 557 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-212ENST00000479586 TKFCQ3LXA3 575 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 DUSP28Q4G0W2 176 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 FAM47CQ5HY64 1035 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 ZNF444Q8N0Y2 327 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-212ENST00000479586 EPB41L4AQ9HCS5 686 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-212ENST00000479586 SCN10AQ9Y5Y9 1956 aa20.66■□□□□ 0.9
HMGN1-212ENST00000479586 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 ZSCAN25Q6NSZ9 544 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 GIMAP6Q6P9H5 292 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 TMCO2Q7Z6W1 182 aaPredicted RBP20.65■□□□□ 0.9
HMGN1-212ENST00000479586 FAM160B2Q86V87 743 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 MORC4Q8TE76 937 aa20.65■□□□□ 0.9
HMGN1-212ENST00000479586 PRR33A8MZF0 331 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 PITPNM1O00562 1244 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 SIRT2Q8IXJ6 389 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 RETREG2Q8NC44 543 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 STAG1Q8WVM7 1258 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 MTG1Q9BT17 334 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-212ENST00000479586 WDR11Q9BZH6 1224 aa20.64■□□□□ 0.89
HMGN1-212ENST00000479586 PLIN4Q96Q06 1357 aa20.63■□□□□ 0.89
HMGN1-212ENST00000479586 SLC1A4P43007 532 aa20.63■□□□□ 0.89
HMGN1-212ENST00000479586 CPT1AP50416 773 aa20.63■□□□□ 0.89
HMGN1-212ENST00000479586 OSBP2Q969R2 916 aa20.63■□□□□ 0.89
HMGN1-212ENST00000479586 GMCL1Q96IK5 515 aa20.63■□□□□ 0.89
HMGN1-212ENST00000479586 UBE2ZQ9H832 354 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-212ENST00000479586 GPHNQ9NQX3 736 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-212ENST00000479586 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 BAIAP3O94812 1187 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 MCCP23508 829 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 TDO2P48775 406 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 MRE11P49959 708 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 RASGRP2Q7LDG7 609 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 FAM178BQ8IXR5 827 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 GJD3Q8N144 294 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 OR6J1Q8NGC5 347 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 NEDD1Q8NHV4 660 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 MTUS1Q9ULD2 1270 aa20.62■□□□□ 0.89
HMGN1-212ENST00000479586 KCNJ6P48051 423 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 WDR5P61964 334 aaKnown RBP20.61■□□□□ 0.89
HMGN1-212ENST00000479586 NFRKBQ6P4R8 1299 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 KCTD1Q719H9 257 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 UIMC1Q96RL1 719 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 LMCD1Q9NZU5 365 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 CCPG1Q9ULG6 757 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 PRR12Q9ULL5 1215 aa20.61■□□□□ 0.89
HMGN1-212ENST00000479586 TRIP12Q14669 1992 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-212ENST00000479586 HMMRO75330 724 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 ALDH5A1P51649 535 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-212ENST00000479586 DEFB103AP81534 67 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 BFSP2Q13515 415 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 LEXMQ3ZCV2 418 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-212ENST00000479586 SUGCTQ9HAC7 445 aa20.6■□□□□ 0.89
HMGN1-212ENST00000479586 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-212ENST00000479586 RBM47A0AV96 593 aaKnown RBP20.59■□□□□ 0.89
HMGN1-212ENST00000479586 RBAK-RBAKDNI3L0D1 243 aa20.59■□□□□ 0.89
HMGN1-212ENST00000479586 IL9P15248 144 aa20.59■□□□□ 0.89
HMGN1-212ENST00000479586 KCNA5P22460 613 aa20.59■□□□□ 0.89
HMGN1-212ENST00000479586 SSTR3P32745 418 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-212ENST00000479586 BAATQ14032 418 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-212ENST00000479586 ZBED2Q9BTP6 218 aa20.59■□□□□ 0.89
HMGN1-212ENST00000479586 NOD1Q9Y239 953 aa20.59■□□□□ 0.89
HMGN1-212ENST00000479586 GPAA1O43292 621 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 PLA2G6O60733 806 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 APPP05067 770 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 TFAP4Q01664 338 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 GPNMBQ14956 572 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 APPBP2Q92624 585 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 COPS5Q92905 334 aa20.58■□□□□ 0.89
HMGN1-212ENST00000479586 M0R2C6 588 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 NFIBO00712 420 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 CHMP4BP1P59074 171 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 NHLH1Q02575 133 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 PTPN11Q06124 597 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-212ENST00000479586 TCTN1Q2MV58 587 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 RCSD1Q6JBY9 416 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 ADD3Q9UEY8 706 aaKnown RBP20.57■□□□□ 0.88
HMGN1-212ENST00000479586 SIP14410 1827 aa20.57■□□□□ 0.88
HMGN1-212ENST00000479586 RAD50Q92878 1312 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 ICAM1P05362 532 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 ERVK-21P61565 698 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 PPP2R5BQ15173 497 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
HMGN1-212ENST00000479586 BRDTQ58F21 947 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-212ENST00000479586 PTCRAQ6ISU1 281 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-212ENST00000479586 SLC30A10Q6XR72 485 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 TGS1Q96RS0 853 aaKnown RBP20.56■□□□□ 0.88
HMGN1-212ENST00000479586 CTAGE1Q96RT6 745 aa20.56■□□□□ 0.88
HMGN1-212ENST00000479586 LINC01553A4QN01 128 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms