RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 EDNRBP24530 442 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 RFC2P35250 354 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 PURAQ00577 322 aaKnown RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 CTDSPL2Q05D32 466 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 PTPN11Q06124 597 aaPredicted RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 BAATQ14032 418 aaPredicted RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 MCMDC2Q4G0Z9 681 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 BRDTQ58F21 947 aaPredicted RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 OTUD7AQ8TE49 926 aaPredicted RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 VWCEQ96DN2 955 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 WDR11Q9BZH6 1224 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
ABCF1-206ENST00000479542 ISY1Q9ULR0 285 aaKnown RBP15.68■□□□□ 0.1
ABCF1-206ENST00000479542 A6NJR5 290 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 B4DLN1 442 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
ABCF1-206ENST00000479542 VPS53Q5VIR6 699 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 NFRKBQ6P4R8 1299 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 FBXO16Q8IX29 292 aaPredicted RBP15.67■□□□□ 0.1
ABCF1-206ENST00000479542 PHOSPHO2Q8TCD6 241 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 ASB2Q96Q27 587 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 TMEM47Q9BQJ4 181 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
ABCF1-206ENST00000479542 TRPV6Q9H1D0 765 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 INCENPQ9NQS7 918 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 SLC4A7Q9Y6M7 1214 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 CHD9Q3L8U1 2897 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 RAD50Q92878 1312 aa15.67■□□□□ 0.1
ABCF1-206ENST00000479542 PDHBP11177 359 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 PDE1AP54750 535 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 MRPS5P82675 430 aaKnown RBP15.66■□□□□ 0.1
ABCF1-206ENST00000479542 ADGRE1Q14246 886 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
ABCF1-206ENST00000479542 TTBK2Q6IQ55 1244 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 OTOP2Q7RTS6 562 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 THEGQ9P2T0 379 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
ABCF1-206ENST00000479542 LCTP09848 1927 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 UMODL1Q5DID0 1318 aa15.66■□□□□ 0.1
ABCF1-206ENST00000479542 NFIBO00712 420 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
ABCF1-206ENST00000479542 CCL23P55773 120 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 ZNF543Q08ER8 600 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 HDAC1Q13547 482 aaPredicted RBP15.65■□□□□ 0.1
ABCF1-206ENST00000479542 AAMPQ13685 434 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 CCDC96Q2M329 555 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 RNF207Q6ZRF8 634 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 DGKHQ86XP1 1220 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 SCFD2Q8WU76 684 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 GPHNQ9NQX3 736 aaPredicted RBP15.65■□□□□ 0.1
ABCF1-206ENST00000479542 YBX2Q9Y2T7 364 aaKnown RBP15.65■□□□□ 0.1
ABCF1-206ENST00000479542 SCN10AQ9Y5Y9 1956 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 TNKSO95271 1327 aa15.65■□□□□ 0.1
ABCF1-206ENST00000479542 NCOR1O75376 2440 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 SLC16A2P36021 539 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 SNAP25P60880 206 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 PSMC6P62333 389 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
ABCF1-206ENST00000479542 TMEM63BQ5T3F8 832 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
ABCF1-206ENST00000479542 NKX2-4Q9H2Z4 354 aa15.64■□□□□ 0.09
ABCF1-206ENST00000479542 RNF41Q9H4P4 317 aaPredicted RBP15.64■□□□□ 0.09
ABCF1-206ENST00000479542 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 PTPDC1A2A3K4 754 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 ACTN1P12814 892 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 ATP2A2P16615 1042 aaKnown RBP15.63■□□□□ 0.09
ABCF1-206ENST00000479542 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
ABCF1-206ENST00000479542 PPP2R5BQ15173 497 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 RASGRP2Q7LDG7 609 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 SESTD1Q86VW0 696 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
ABCF1-206ENST00000479542 PURBQ96QR8 312 aaKnown RBP15.63■□□□□ 0.09
ABCF1-206ENST00000479542 SLC9A7Q96T83 725 aa15.63■□□□□ 0.09
ABCF1-206ENST00000479542 PARNO95453 639 aaKnown RBP15.62■□□□□ 0.09
ABCF1-206ENST00000479542 PDE4DQ08499 809 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 BFSP2Q13515 415 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 TTLL4Q14679 1199 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 TMEM67Q5HYA8 995 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 MFSD6Q6ZSS7 791 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 OR6J1Q8NGC5 347 aa15.62■□□□□ 0.09
ABCF1-206ENST00000479542 TRMT13Q9NUP7 481 aaKnown RBP15.62■□□□□ 0.09
ABCF1-206ENST00000479542 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
ABCF1-206ENST00000479542 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 IQCF3P0C7M6 154 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 PTGS1P23219 599 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 RBL2Q08999 1139 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 AAK1Q2M2I8 961 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 PPP2R2DQ66LE6 453 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 CCDC62Q6P9F0 684 aa15.61■□□□□ 0.09
ABCF1-206ENST00000479542 CAGE1Q8TC20 777 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms