RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 SCUBE1Q8IWY4 988 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 SLC26A8Q96RN1 970 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 CRTAC1Q9NQ79 661 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 IMPACTQ9P2X3 320 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
CCDC58-204ENST00000479414 CARMIL2Q6F5E8 1435 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 ARNTLO00327 626 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 MEFVO15553 781 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-204ENST00000479414 FOXB2Q5VYV0 432 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 MBLAC2Q68D91 279 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 JAZF1Q86VZ6 243 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 CCDC103Q8IW40 242 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 FAM168AQ92567 244 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 TMEFF2Q9UIK5 374 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-204ENST00000479414 YBX2Q9Y2T7 364 aaKnown RBP8.14□□□□□ -1.11
CCDC58-204ENST00000479414 NPFFR2Q9Y5X5 522 aa8.14□□□□□ -1.11
CCDC58-204ENST00000479414 PNLIPP16233 465 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 NOP9Q86U38 636 aaKnown RBP8.13□□□□□ -1.11
CCDC58-204ENST00000479414 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 ZSWIM2Q8NEG5 633 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 DIO2Q92813 273 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 EXOC2Q96KP1 924 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 CDC6Q99741 560 aa8.13□□□□□ -1.11
CCDC58-204ENST00000479414 TRBV23-1A0A0A0MS06 115 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 C7orf72A4D263 438 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.12□□□□□ -1.11
CCDC58-204ENST00000479414 NPHS1O60500 1241 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 PRKCAP17252 672 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 LTBRP36941 435 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 MVKQ03426 396 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 INF2Q27J81 1249 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 FAM209AQ5JX71 171 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 NUP43Q8NFH3 380 aa8.12□□□□□ -1.11
CCDC58-204ENST00000479414 KISS1RQ969F8 398 aaPredicted RBP8.12□□□□□ -1.11
CCDC58-204ENST00000479414 ZNF503-AS2A6NEH8 195 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
CCDC58-204ENST00000479414 NTRK3Q16288 839 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
CCDC58-204ENST00000479414 IPO9Q96P70 1041 aaKnown RBP8.11□□□□□ -1.11
CCDC58-204ENST00000479414 DHRS4Q9BTZ2 278 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 SLC6A17Q9H1V8 727 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 PDLIM7Q9NR12 457 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
CCDC58-204ENST00000479414 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
CCDC58-204ENST00000479414 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 MSL3P1P0C860 447 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 CYP4F8P98187 520 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 USP53Q70EK8 1073 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 SH3TC2Q8TF17 1288 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 DPF3Q92784 378 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 INTS4Q96HW7 963 aaKnown RBP8.1□□□□□ -1.11
CCDC58-204ENST00000479414 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
CCDC58-204ENST00000479414 MTA3Q9BTC8 594 aa8.1□□□□□ -1.11
CCDC58-204ENST00000479414 MRPS23Q9Y3D9 190 aaKnown RBP8.1□□□□□ -1.11
CCDC58-204ENST00000479414 A0A1W2PQ27 194 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 A0A1W2PQ64 194 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 A0A1W2PQC6 194 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 A0A1W2PQD8 194 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.11
CCDC58-204ENST00000479414 GALK1P51570 392 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 SQSTM1Q13501 440 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 RCBTB1Q8NDN9 531 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 TNFRSF12AQ9NP84 129 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 GPR27Q9NS67 375 aa8.09□□□□□ -1.11
CCDC58-204ENST00000479414 TIMM13Q9Y5L4 95 aaPredicted RBP8.09□□□□□ -1.11
CCDC58-204ENST00000479414 MRPL42Q9Y6G3 142 aaKnown RBP8.09□□□□□ -1.11
CCDC58-204ENST00000479414 ARL4AP40617 200 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 STYK1Q6J9G0 422 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 LZTR1Q8N653 840 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 LIN37Q96GY3 246 aaPredicted RBP8.08□□□□□ -1.12
CCDC58-204ENST00000479414 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 PHF20Q9BVI0 1012 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 FAM53CQ9NYF3 392 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC58-204ENST00000479414 GULP1Q9UBP9 304 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
CCDC58-204ENST00000479414 BLACEA4D250 179 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 MYO1BO43795 1136 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 C6orf222P0C671 652 aaPredicted RBP8.07□□□□□ -1.12
CCDC58-204ENST00000479414 LCP1P13796 627 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 GTF2A2P52657 109 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
CCDC58-204ENST00000479414 Q8N1Y9 231 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC58-204ENST00000479414 RWDD3Q9Y3V2 267 aa8.07□□□□□ -1.12
CCDC58-204ENST00000479414 SRGAP3O43295 1099 aa8.06□□□□□ -1.12
CCDC58-204ENST00000479414 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
CCDC58-204ENST00000479414 MAMDC2Q7Z304 686 aaPredicted RBP8.06□□□□□ -1.12
CCDC58-204ENST00000479414 PLEKHO2Q8TD55 490 aa8.06□□□□□ -1.12
CCDC58-204ENST00000479414 PTPRN2Q92932 1015 aa8.06□□□□□ -1.12
CCDC58-204ENST00000479414 GPR85P60893 370 aa8.05□□□□□ -1.12
CCDC58-204ENST00000479414 GABREP78334 506 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms