RNA–Protein interactions for RNA: ENST00000479034.5

SRRM1-212, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,671 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-212ENST00000479034 SLFN13Q68D06 897 aa8.38□□□□□ -1.07
SRRM1-212ENST00000479034 GTF3C6Q969F1 213 aa8.38□□□□□ -1.07
SRRM1-212ENST00000479034 PIGSQ96S52 555 aa8.38□□□□□ -1.07
SRRM1-212ENST00000479034 SZT2Q5T011 3432 aa8.38□□□□□ -1.07
SRRM1-212ENST00000479034 NAV1Q8NEY1 1877 aa8.38□□□□□ -1.07
SRRM1-212ENST00000479034 KLRF2D3W0D1 207 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 AOC2O75106 756 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 ADH1BP00325 375 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 UBXN2AP68543 259 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 PDXDC2PQ6P474 469 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.07
SRRM1-212ENST00000479034 TM6SF1Q9BZW5 370 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 MAD2L2Q9UI95 211 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 PTK2Q05397 1052 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 SUPT20HL1Q3ZLR7 823 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 SLC30A10Q6XR72 485 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 SYNE3Q6ZMZ3 975 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 NSUN7Q8NE18 718 aaKnown RBP8.37□□□□□ -1.07
SRRM1-212ENST00000479034 PRIMPOLQ96LW4 560 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 PAGR1Q9BTK6 254 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 GBA2Q9HCG7 927 aaPredicted RBP8.37□□□□□ -1.07
SRRM1-212ENST00000479034 SMC3Q9UQE7 1217 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 CSADQ9Y600 493 aa8.37□□□□□ -1.07
SRRM1-212ENST00000479034 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 FGRP09769 529 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ZNF157P51786 506 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 BECN1Q14457 450 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 TMEM179Q6ZVK1 233 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 TBC1D5Q92609 795 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 MKNK1Q9BUB5 465 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 HERC5Q9UII4 1024 aaKnown RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SIPA1L1O43166 1804 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ECM29Q5VYK3 1845 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SORBS3O60504 671 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 FLOT1O75955 427 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 VCAM1P19320 739 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 NR5A1Q13285 461 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SCYL3Q8IZE3 742 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 CTCFLQ8NI51 663 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 GJA10Q969M2 543 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 KANSL2Q9H9L4 492 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ROBO3Q96MS0 1386 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 MAST2Q6P0Q8 1798 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 DICER1Q9UPY3 1922 aaKnown RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 PPP1R11O60927 126 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ASNSP08243 561 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 NCLP19338 710 aaKnown RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 NF2P35240 595 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ADGRF4Q8IZF3 695 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 FAM184AQ8NB25 1140 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 TMEM87BQ96K49 555 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 AGBL1Q96MI9 1066 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 EHD4Q9H223 541 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 RPAP3Q9H6T3 665 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-212ENST00000479034 ZNF287Q9HBT7 754 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SWAP70Q9UH65 585 aa8.36□□□□□ -1.07
SRRM1-212ENST00000479034 SMCHD1A6NHR9 2005 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 UNC80Q8N2C7 3258 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 SYT1P21579 422 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 PTGS1P23219 599 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 NTRK3Q16288 839 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 UBE2SQ16763 222 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 LARP1BQ659C4 914 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 RAVER2Q9HCJ3 691 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 CTNND1O60716 968 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 PFKFB2O60825 505 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 MYCP01106 439 aaPredicted RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 IREB2P48200 963 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 PDE4CQ08493 712 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 DCAF15Q66K64 600 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 TRMT1LQ7Z2T5 733 aaKnown RBP8.35□□□□□ -1.07
SRRM1-212ENST00000479034 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 ATG4CQ96DT6 458 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 ZDHHC9Q9Y397 364 aa8.35□□□□□ -1.07
SRRM1-212ENST00000479034 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 WNT7AO00755 349 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 LIFRP42702 1097 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 FKBP1CQ5VVH2 108 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
SRRM1-212ENST00000479034 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms