RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ECM1Q16610 540 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 MAST2Q6P0Q8 1798 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 MYMKA6NI61 221 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 PLEKP08567 350 aaPredicted RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 CYP27A1Q02318 531 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 EXOC1Q9NV70 894 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 LUC7L2Q9Y383 392 aaKnown RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 TNNI2P48788 182 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 GALNT17Q6IS24 598 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 OR8K1Q8NGG5 319 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 P2RX5Q93086 422 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 CCDC51Q96ER9 411 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 EPHB6O15197 1021 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 GNA11P29992 359 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 PRPHP41219 470 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 NFIAQ12857 509 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 C15orf52Q6ZUT6 534 aaKnown RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 GDAP1L1Q96MZ0 367 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
VPS52-217ENST00000478934 NAV1Q8NEY1 1877 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 MYH1P12882 1939 aa12.09□□□□□ -0.47
VPS52-217ENST00000478934 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.47
VPS52-217ENST00000478934 PHACTR2O75167 634 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 TAL1P17542 331 aaPredicted RBP12.08□□□□□ -0.47
VPS52-217ENST00000478934 CYP2C19P33261 490 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 MTIF2P46199 727 aaKnown RBP12.08□□□□□ -0.47
VPS52-217ENST00000478934 VSNL1P62760 191 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 CALCRLQ16602 461 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 CERKQ8TCT0 537 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 MTMR9Q96QG7 549 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 THAP9Q9H5L6 903 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 RIOX1Q9H6W3 641 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 PDE11AQ9HCR9 933 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 ABCB6Q9NP58 842 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.08□□□□□ -0.47
VPS52-217ENST00000478934 LRWD1Q9UFC0 647 aa12.08□□□□□ -0.47
VPS52-217ENST00000478934 GAKO14976 1311 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 ZMYND10O75800 440 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 IDEP14735 1019 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 TRIM21P19474 475 aaKnown RBP12.08□□□□□ -0.48
VPS52-217ENST00000478934 CCNE1P24864 410 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
VPS52-217ENST00000478934 SNAP25P60880 206 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 STIM1Q13586 685 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 NAPGQ99747 312 aaPredicted RBP12.08□□□□□ -0.48
VPS52-217ENST00000478934 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 USP40Q9NVE5 1235 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
VPS52-217ENST00000478934 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 LAD1O00515 517 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 ATP1A1P05023 1023 aaKnown RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 SRGNP10124 158 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 HNRNPH2P55795 449 aaKnown RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 NOC4LQ9BVI4 516 aaKnown RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 TBC1D7Q9P0N9 293 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 TRIM37O94972 964 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 GABPAQ06546 454 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 RAD51AP2Q09MP3 1159 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
VPS52-217ENST00000478934 FGFBP2Q9BYJ0 223 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 TTYH3Q9C0H2 523 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 CDK5RAP2Q96SN8 1893 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L15C9J2P7 530 aa12.07□□□□□ -0.48
VPS52-217ENST00000478934 USP17L13C9JLJ4 530 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms