RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 EDNRBP24530 442 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 RBM25P49756 843 aaKnown RBP11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 GNAQP50148 359 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 FGD1P98174 961 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 DNERQ8NFT8 737 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 CTCFLQ8NI51 663 aaPredicted RBP11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 NUP133Q8WUM0 1156 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 PIGSQ96S52 555 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 HTATIP2Q9BUP3 242 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 AGXT2Q9BYV1 514 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 BRPF3Q9ULD4 1205 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 FAM184BQ9ULE4 1060 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 PCDHA1Q9Y5I3 950 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 LCTP09848 1927 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 MCM3APO60318 1980 aa11.56□□□□□ -0.56
SCAMP3-206ENST00000478737 PTPDC1A2A3K4 754 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 DHX16O60231 1041 aaKnown RBP11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 RARBP10826 455 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 EVCP57679 992 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 NBR1Q14596 966 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 USH1GQ495M9 461 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 CCSAPQ6IQ19 270 aaPredicted RBP11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 TAPT1Q6NXT6 567 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 APOA5Q6Q788 366 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 SYTL5Q8TDW5 730 aaPredicted RBP11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 MYL10Q9BUA6 226 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 TM6SF1Q9BZW5 370 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 C11orf49Q9H6J7 331 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
SCAMP3-206ENST00000478737 RBM47A0AV96 593 aaKnown RBP11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 ADAMTS4O75173 837 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 HSD17B4P51659 736 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 FUT2Q10981 343 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 LRRC41Q15345 812 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 PRPF38BQ5VTL8 546 aaKnown RBP11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 IQSEC1Q6DN90 963 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 TMTC3Q6ZXV5 915 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 KLHDC9Q8NEP7 349 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 VTA1Q9NP79 307 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 XPNPEP3Q9NQH7 507 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 FAM217BQ9NTX9 383 aaPredicted RBP11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 Q9Y3F1 56 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 CEP290O15078 2479 aa11.54□□□□□ -0.56
SCAMP3-206ENST00000478737 GOLGA8BA8MQT2 603 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 B4DLN1 442 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 ADCY6O43306 1168 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 PLEKHA8P1O95397 391 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 CALML3P27482 149 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 GJA9P57773 515 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 C1orf53Q5VUE5 145 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 ANO1Q5XXA6 986 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 Q6ZUG5 572 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 RAB11FIP4Q86YS3 637 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 NSUN6Q8TEA1 469 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 TAAR1Q96RJ0 339 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 IWS1Q96ST2 819 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 TSEN34Q9BSV6 310 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 UPF3AQ9H1J1 476 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 NAP1L2Q9ULW6 460 aaPredicted RBP11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
SCAMP3-206ENST00000478737 KLF18A0A0U1RQI7 1052 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 CTAGE5O15320 804 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 ZBTB43O43298 467 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 PGK1P00558 417 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 RXRAP19793 462 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 SNX17Q15036 470 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 RNF180Q86T96 592 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 HOMER1Q86YM7 354 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 TEX2Q8IWB9 1127 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 DPF3Q92784 378 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 BRF1Q92994 677 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 MPHOSPH6Q99547 160 aaKnown RBP11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 PDRG1Q9NUG6 133 aa11.52□□□□□ -0.57
SCAMP3-206ENST00000478737 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms