RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 USH1GQ495M9 461 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 ANKS1AQ92625 1134 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 TBX21Q9UL17 535 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 RPS6P62753 249 aaKnown RBP26.73■■□□□ 1.87
C9orf3-216ENST00000478603 FPGSQ05932 587 aa26.73■■□□□ 1.87
C9orf3-216ENST00000478603 FAM161BQ96MY7 647 aa26.73■■□□□ 1.87
C9orf3-216ENST00000478603 KRT23Q9C075 422 aa26.73■■□□□ 1.87
C9orf3-216ENST00000478603 PNMA2Q9UL42 364 aa26.73■■□□□ 1.87
C9orf3-216ENST00000478603 TIMP1P01033 207 aa26.72■■□□□ 1.87
C9orf3-216ENST00000478603 FAM126BQ8IXS8 530 aa26.72■■□□□ 1.87
C9orf3-216ENST00000478603 CDC37Q16543 378 aaPredicted RBP26.71■■□□□ 1.87
C9orf3-216ENST00000478603 Q9Y3F1 56 aa26.71■■□□□ 1.87
C9orf3-216ENST00000478603 FAM109BQ6ICB4 259 aaPredicted RBP26.7■■□□□ 1.86
C9orf3-216ENST00000478603 ADGRF4Q8IZF3 695 aa26.7■■□□□ 1.86
C9orf3-216ENST00000478603 RNPC3Q96LT9 517 aaKnown RBP26.7■■□□□ 1.86
C9orf3-216ENST00000478603 UBAC1Q9BSL1 405 aa26.7■■□□□ 1.86
C9orf3-216ENST00000478603 WDR11Q9BZH6 1224 aa26.7■■□□□ 1.86
C9orf3-216ENST00000478603 CNNM2Q9H8M5 875 aa26.7■■□□□ 1.86
C9orf3-216ENST00000478603 STXBP5LQ9Y2K9 1186 aa26.7■■□□□ 1.86
C9orf3-216ENST00000478603 RAD50Q92878 1312 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 LOC102724159A0A0B4J2E5 919 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 PWP2Q15269 919 aaKnown RBP26.69■■□□□ 1.86
C9orf3-216ENST00000478603 DUSP28Q4G0W2 176 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 ASPRV1Q53RT3 343 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 CYB5R4Q7L1T6 521 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 GUCD1Q96NT3 240 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 PPP1R12CQ9BZL4 782 aa26.69■■□□□ 1.86
C9orf3-216ENST00000478603 GRIN2DO15399 1336 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 TLR3O15455 904 aaKnown RBP26.68■■□□□ 1.86
C9orf3-216ENST00000478603 ZEB2O60315 1214 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 CABYRO75952 493 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 PARP1P09874 1014 aaKnown RBP26.68■■□□□ 1.86
C9orf3-216ENST00000478603 CHMLP26374 656 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 PSMC6P62333 389 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 PTH1RQ03431 593 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 PDE4DQ08499 809 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 ITGA7Q13683 1181 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 ZNF697Q5TEC3 545 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 SLC43A3Q8NBI5 491 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 SLC17A8Q8NDX2 589 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 TBC1D5Q92609 795 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 VAT1LQ9HCJ6 419 aa26.68■■□□□ 1.86
C9orf3-216ENST00000478603 DHX16O60231 1041 aaKnown RBP26.67■■□□□ 1.86
C9orf3-216ENST00000478603 CD4P01730 458 aa26.67■■□□□ 1.86
C9orf3-216ENST00000478603 QRICH1Q2TAL8 776 aa26.67■■□□□ 1.86
C9orf3-216ENST00000478603 IFIT1BQ5T764 474 aaKnown RBP26.67■■□□□ 1.86
C9orf3-216ENST00000478603 MFSD5Q6N075 450 aa26.67■■□□□ 1.86
C9orf3-216ENST00000478603 RBM47A0AV96 593 aaKnown RBP26.66■■□□□ 1.86
C9orf3-216ENST00000478603 EDNRBP24530 442 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 SMAD3P84022 425 aaKnown RBP26.66■■□□□ 1.86
C9orf3-216ENST00000478603 SEC23AQ15436 765 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 STAG2Q8N3U4 1231 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 DNERQ8NFT8 737 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 RUFY2Q8WXA3 655 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 JMJD4Q9H9V9 463 aa26.66■■□□□ 1.86
C9orf3-216ENST00000478603 ABCB11O95342 1321 aa26.65■■□□□ 1.86
C9orf3-216ENST00000478603 CYP21A2P08686 494 aa26.65■■□□□ 1.86
C9orf3-216ENST00000478603 RGS22Q8NE09 1264 aa26.65■■□□□ 1.86
C9orf3-216ENST00000478603 OR6J1Q8NGC5 347 aa26.65■■□□□ 1.86
C9orf3-216ENST00000478603 MPHOSPH6Q99547 160 aaKnown RBP26.65■■□□□ 1.86
C9orf3-216ENST00000478603 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.65■■□□□ 1.863e-10■■■□□ 15.4
C9orf3-216ENST00000478603 CSF2RAP15509 400 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 CYP2C18P33260 490 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 C16orf59Q7L2K0 433 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 COPS5Q92905 334 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 TRPV6Q9H1D0 765 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 COL20A1Q9P218 1284 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 TAF6LQ9Y6J9 622 aa26.64■■□□□ 1.86
C9orf3-216ENST00000478603 PPIGQ13427 754 aaKnown RBP eCLIP26.63■■□□□ 1.853e-11■□□□□ 10.8
C9orf3-216ENST00000478603 PPP2R5BQ15173 497 aa26.63■■□□□ 1.85
C9orf3-216ENST00000478603 FBXO11Q86XK2 927 aa26.63■■□□□ 1.85
C9orf3-216ENST00000478603 SYTL5Q8TDW5 730 aaPredicted RBP26.63■■□□□ 1.85
C9orf3-216ENST00000478603 TAAR1Q96RJ0 339 aa26.63■■□□□ 1.85
C9orf3-216ENST00000478603 UMODL1Q5DID0 1318 aa26.63■■□□□ 1.85
C9orf3-216ENST00000478603 B4GALT4O60513 344 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 MYL3P08590 195 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 ACRP10323 421 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 TRDNQ13061 729 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 TMEM199Q8N511 208 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 SCFD2Q8WU76 684 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 SEMA6BQ9H3T3 888 aa26.62■■□□□ 1.85
C9orf3-216ENST00000478603 U3KPZ7 1027 aaPredicted RBP26.62■■□□□ 1.85
C9orf3-216ENST00000478603 BAZ2BQ9UIF8 2168 aaKnown RBP26.62■■□□□ 1.85
C9orf3-216ENST00000478603 SGSM2O43147 1006 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 CPT1AP50416 773 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 TMEM240Q5SV17 173 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 TTYH1Q9H313 450 aaPredicted RBP26.61■■□□□ 1.85
C9orf3-216ENST00000478603 POLR3EQ9NVU0 708 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 MAD2L2Q9UI95 211 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 KIAA1217Q5T5P2 1943 aa26.61■■□□□ 1.85
C9orf3-216ENST00000478603 B4DLN1 442 aa26.6■■□□□ 1.85
C9orf3-216ENST00000478603 KLRF2D3W0D1 207 aa26.6■■□□□ 1.85
C9orf3-216ENST00000478603 ARIH2O95376 493 aa26.6■■□□□ 1.85
C9orf3-216ENST00000478603 TXNP10599 105 aaKnown RBP26.6■■□□□ 1.85
C9orf3-216ENST00000478603 MRPL12P52815 198 aaKnown RBP26.6■■□□□ 1.85
C9orf3-216ENST00000478603 PURAQ00577 322 aaKnown RBP26.6■■□□□ 1.85
C9orf3-216ENST00000478603 HIPK3Q9H422 1215 aa26.6■■□□□ 1.85
C9orf3-216ENST00000478603 SENP2Q9HC62 589 aa26.6■■□□□ 1.85
C9orf3-216ENST00000478603 MRPL11Q9Y3B7 192 aaKnown RBP26.6■■□□□ 1.85
C9orf3-216ENST00000478603 SCN10AQ9Y5Y9 1956 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms