RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDCD11-204ENST00000478543 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
PDCD11-204ENST00000478543 PLXNB2O15031 1838 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 BAZ2BQ9UIF8 2168 aaKnown RBP13.47□□□□□ -0.25
PDCD11-204ENST00000478543 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 STXBP3O00186 592 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 STX6O43752 255 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-204ENST00000478543 ZBED4O75132 1171 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 PABPC4Q13310 644 aaKnown RBP eCLIP13.46□□□□□ -0.251e-10■■□□□ 14.2
PDCD11-204ENST00000478543 PKP1Q13835 747 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 TRIM29Q14134 588 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 COG2Q14746 738 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 USH1GQ495M9 461 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 KRT40Q6A162 431 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 FBXO11Q86XK2 927 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-204ENST00000478543 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
PDCD11-204ENST00000478543 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 SPDYE16A6NNV3 312 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-204ENST00000478543 TNPO2O14787 897 aaKnown RBP13.45□□□□□ -0.26
PDCD11-204ENST00000478543 XBP1P17861 261 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
PDCD11-204ENST00000478543 NAPAP54920 295 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 TYW1BQ6NUM6 668 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 P2RX7Q99572 595 aaKnown RBP13.45□□□□□ -0.26
PDCD11-204ENST00000478543 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
PDCD11-204ENST00000478543 MTMR6Q9Y217 621 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 RLFQ13129 1914 aa13.45□□□□□ -0.26
PDCD11-204ENST00000478543 VWA5AO00534 786 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 NLRP5P59047 1200 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 FBXO18Q8NFZ0 1043 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
PDCD11-204ENST00000478543 SLC38A10Q9HBR0 1119 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
PDCD11-204ENST00000478543 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
PDCD11-204ENST00000478543 hCG_1984214I3L0E3 225 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 PEX10O60683 326 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 HERVK_113P62684 666 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 PLS1Q14651 629 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 FERMT3Q86UX7 667 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 ANKRD13CQ8N6S4 541 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 ZNF713Q8N859 430 aaPredicted RBP13.43□□□□□ -0.26
PDCD11-204ENST00000478543 CCDC148Q8NFR7 591 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 RAPGEFL1Q9UHV5 662 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 ZDHHC9Q9Y397 364 aa13.43□□□□□ -0.26
PDCD11-204ENST00000478543 COL11A1P12107 1806 aaPredicted RBP13.43□□□□□ -0.26
PDCD11-204ENST00000478543 ZNF536O15090 1300 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 BRD1O95696 1058 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 MMP1P03956 469 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 ICAM1P05362 532 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
PDCD11-204ENST00000478543 FDX1P10109 184 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 ALAS1P13196 640 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 NUCB2P80303 420 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
PDCD11-204ENST00000478543 GNL2Q13823 731 aaKnown RBP13.42□□□□□ -0.26
PDCD11-204ENST00000478543 TMEM132BQ14DG7 1078 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 PPP1R18Q6NYC8 613 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
PDCD11-204ENST00000478543 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 C11orf49Q9H6J7 331 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 BTBD7Q9P203 1132 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 SLC45A1Q9Y2W3 748 aa13.42□□□□□ -0.26
PDCD11-204ENST00000478543 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 ABCB11O95342 1321 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 KIF28PB7ZC32 967 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 KRT2P35908 639 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 ADCY7P51828 1080 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDCD11-204ENST00000478543 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
PDCD11-204ENST00000478543 POTEEQ6S8J3 1075 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 LBX2Q6XYB7 198 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 DIS3L2Q8IYB7 885 aaKnown RBP13.41□□□□□ -0.26
PDCD11-204ENST00000478543 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
PDCD11-204ENST00000478543 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
PDCD11-204ENST00000478543 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms