RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CBFA2T2O43439 604 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 POU4F1Q01851 419 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 RCSD1Q6JBY9 416 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 USP48Q86UV5 1035 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 NOX5Q96PH1 765 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 GPR20Q99678 358 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 MCMBPQ9BTE3 642 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 LNPKQ9C0E8 428 aa5.96□□□□□ -1.46
HPS3-205ENST00000478525 GUCY2CP25092 1073 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 MAGEA10P43363 369 aaPredicted RBP5.95□□□□□ -1.46
HPS3-205ENST00000478525 GJA9P57773 515 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 PPP2R5DQ14738 602 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 LDLRAD1Q5T700 205 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 CABP7Q86V35 215 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 RGS22Q8NE09 1264 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 SMARCC2Q8TAQ2 1214 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 ZNF214Q9UL59 606 aaPredicted RBP5.95□□□□□ -1.46
HPS3-205ENST00000478525 PALD1Q9ULE6 856 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 PPT2Q9UMR5 302 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 RWDD3Q9Y3V2 267 aa5.95□□□□□ -1.46
HPS3-205ENST00000478525 STXBP3O00186 592 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 ITGB3P05106 788 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 PDIA4P13667 645 aaKnown RBP5.94□□□□□ -1.46
HPS3-205ENST00000478525 ADAM17P78536 824 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 FBXW10Q5XX13 1052 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 EEF1DP3Q658K8 133 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 RBBP8NLQ8NC74 664 aaPredicted RBP5.94□□□□□ -1.46
HPS3-205ENST00000478525 ADCY4Q8NFM4 1077 aa5.94□□□□□ -1.46
HPS3-205ENST00000478525 SPATA6Q9NWH7 488 aaPredicted RBP5.94□□□□□ -1.46
HPS3-205ENST00000478525 A0A087WZG4 1122 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 AURKAO14965 403 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 TRIM26Q12899 539 aaPredicted RBP5.93□□□□□ -1.46
HPS3-205ENST00000478525 ZNF326Q5BKZ1 582 aaKnown RBP5.93□□□□□ -1.46
HPS3-205ENST00000478525 ZNF761Q86XN6 746 aaPredicted RBP5.93□□□□□ -1.46
HPS3-205ENST00000478525 LZTR1Q8N653 840 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 NETO2Q8NC67 525 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 HAUS7Q99871 368 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 NTMQ9P121 344 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 LTBP3Q9NS15 1303 aa5.93□□□□□ -1.46
HPS3-205ENST00000478525 PPP1R11O60927 126 aaPredicted RBP5.92□□□□□ -1.46
HPS3-205ENST00000478525 TNFRSF1AP19438 455 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 SARSP49591 514 aaKnown RBP5.92□□□□□ -1.46
HPS3-205ENST00000478525 CACNB2Q08289 660 aaPredicted RBP5.92□□□□□ -1.46
HPS3-205ENST00000478525 TCEAL1Q15170 157 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 ZNF394Q53GI3 561 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 CPA5Q8WXQ8 436 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 ZBTB8AQ96BR9 441 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 PEX11GQ96HA9 241 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 RBM15Q96T37 977 aaKnown RBP eCLIP5.92□□□□□ -1.46
HPS3-205ENST00000478525 MTA3Q9BTC8 594 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 SMPD4Q9NXE4 827 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 WHRNQ9P202 907 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 GULP1Q9UBP9 304 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 DIS3Q9Y2L1 958 aaKnown RBP5.92□□□□□ -1.46
HPS3-205ENST00000478525 PCDHGB7Q9Y5F8 929 aa5.92□□□□□ -1.46
HPS3-205ENST00000478525 ZNF76P36508 570 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 SMAD4Q13485 552 aaKnown RBP5.91□□□□□ -1.46
HPS3-205ENST00000478525 SLC9A5Q14940 896 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 DPY19L1Q2PZI1 675 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 WWC2Q6AWC2 1192 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 RNF34Q969K3 372 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 KLHL25Q9H0H3 589 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 NUDT5Q9UKK9 219 aa5.91□□□□□ -1.46
HPS3-205ENST00000478525 MATN3O15232 486 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 VAMP4O75379 141 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 CPNE8Q86YQ8 564 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 ADAMTS17Q8TE56 1095 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 GZF1Q9H116 711 aaPredicted RBP5.9□□□□□ -1.46
HPS3-205ENST00000478525 SIT1Q9Y3P8 196 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 BACE2Q9Y5Z0 518 aa5.9□□□□□ -1.46
HPS3-205ENST00000478525 AKAP8O43823 692 aaKnown RBP5.89□□□□□ -1.47
HPS3-205ENST00000478525 C8BP07358 591 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 SEPHS1P49903 392 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 FANCCQ00597 558 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 TTLL7Q6ZT98 887 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 LINC00482Q8N8I6 264 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 SYT3Q9BQG1 590 aa5.89□□□□□ -1.47
HPS3-205ENST00000478525 CGGBP1Q9UFW8 167 aaPredicted RBP5.89□□□□□ -1.47
HPS3-205ENST00000478525 C2orf71A6NGG8 1288 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 ZBTB7AO95365 584 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 EPHX1P07099 455 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 CYP2C8P10632 490 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 ZXDAP98168 799 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 GNPTABQ3T906 1256 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 HEATR6Q6AI08 1181 aaKnown RBP5.88□□□□□ -1.47
HPS3-205ENST00000478525 FGD4Q96M96 766 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 C8orf49Q96NF6 230 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 GORASP1Q9BQQ3 440 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 GBP3Q9H0R5 595 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 BCL11AQ9H165 835 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 PCDHB10Q9UN67 800 aa5.88□□□□□ -1.47
HPS3-205ENST00000478525 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
HPS3-205ENST00000478525 ZNF20P17024 532 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 THBS2P35442 1172 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 AMPD2Q01433 879 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 TBC1D10BQ4KMP7 808 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms