RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 SEZ6LQ9BYH1 1024 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
RCC1-211ENST00000478232 TNKSO95271 1327 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 ITGB8P26012 769 aa16.09■□□□□ 0.17
RCC1-211ENST00000478232 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
RCC1-211ENST00000478232 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
RCC1-211ENST00000478232 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
RCC1-211ENST00000478232 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
RCC1-211ENST00000478232 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
RCC1-211ENST00000478232 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
RCC1-211ENST00000478232 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
RCC1-211ENST00000478232 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
RCC1-211ENST00000478232 SZT2Q5T011 3432 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.16
RCC1-211ENST00000478232 TLR3O15455 904 aaKnown RBP16.08■□□□□ 0.16
RCC1-211ENST00000478232 TIMP1P01033 207 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 PDE4DQ08499 809 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
RCC1-211ENST00000478232 USH1GQ495M9 461 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 C9orf50Q5SZB4 431 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 ABCB11O95342 1321 aa16.08■□□□□ 0.16
RCC1-211ENST00000478232 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
RCC1-211ENST00000478232 CYP21A2P08686 494 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 PTH1RQ03431 593 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 FPGSQ05932 587 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 SEC23AQ15436 765 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 CYB5R4Q7L1T6 521 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 MTMR10Q9NXD2 777 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 TBX21Q9UL17 535 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 MCM3APO60318 1980 aa16.07■□□□□ 0.16
RCC1-211ENST00000478232 SGSM2O43147 1006 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 EDNRBP24530 442 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 ITGA7Q13683 1181 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 TMEM63BQ5T3F8 832 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 MFSD5Q6N075 450 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 Q7L0L9 218 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 FAM126BQ8IXS8 530 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
RCC1-211ENST00000478232 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
RCC1-211ENST00000478232 LAMA3Q16787 3333 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 ERICH2A1L162 156 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
RCC1-211ENST00000478232 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
RCC1-211ENST00000478232 CD4P01730 458 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 EPHB4P54760 987 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
RCC1-211ENST00000478232 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 MAP4K1Q92918 833 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 POLR3EQ9NVU0 708 aa16.05■□□□□ 0.16
RCC1-211ENST00000478232 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 E7EWF7 191 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 PTGS1P23219 599 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 CPT1AP50416 773 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 SMAD3P84022 425 aaKnown RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 TRAF1Q13077 416 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 SART3Q15020 963 aaKnown RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 TMEM199Q8N511 208 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 SYTL5Q8TDW5 730 aaPredicted RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
RCC1-211ENST00000478232 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
RCC1-211ENST00000478232 LTBP2Q14767 1821 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 KPNA6O60684 536 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■□□□□ 9.1
RCC1-211ENST00000478232 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 MTMR8Q96EF0 704 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
RCC1-211ENST00000478232 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
RCC1-211ENST00000478232 MAP3K20Q9NYL2 800 aaKnown RBP16.03■□□□□ 0.16
RCC1-211ENST00000478232 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
RCC1-211ENST00000478232 ZBTB5O15062 677 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
RCC1-211ENST00000478232 TTLL4Q14679 1199 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 WTAPQ15007 396 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 STXBP2Q15833 593 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 RMDN3Q96TC7 470 aa16.02■□□□□ 0.16
RCC1-211ENST00000478232 A6NJR5 290 aa16.01■□□□□ 0.15
RCC1-211ENST00000478232 MYL3P08590 195 aa16.01■□□□□ 0.15
RCC1-211ENST00000478232 PSMC6P62333 389 aa16.01■□□□□ 0.15
RCC1-211ENST00000478232 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms