RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 APOBRQ0VD83 1088 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 IFIT5Q13325 482 aaKnown RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 IMMTQ16891 758 aaKnown RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 FAM173BQ6P4H8 233 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 SASS6Q6UVJ0 657 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 ZBTB38Q8NAP3 1195 aaPredicted RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 BICD2Q8TD16 824 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 PIBF1Q8WXW3 757 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 APPBP2Q92624 585 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF512BQ96KM6 892 aaPredicted RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 PUS3Q9BZE2 481 aaKnown RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 SMG9Q9H0W8 520 aaKnown RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 MRVI1Q9Y6F6 885 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 BCORQ6W2J9 1755 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 SALL1Q9NSC2 1324 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 MYH13Q9UKX3 1938 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 ANKRD18BA2A2Z9 1011 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 FAM196BA6NMK8 535 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 DHX16O60231 1041 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 CHGBP05060 677 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 PDIA3P30101 505 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 ADORA1P30542 326 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 TTF1Q15361 905 aaPredicted RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 CRTC2Q53ET0 693 aaPredicted RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 IER5Q5VY09 327 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 INTS5Q6P9B9 1019 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 NLRP10Q86W26 655 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 DNAJC10Q8IXB1 793 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 TDRD7Q8NHU6 1098 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 TRPM4Q8TD43 1214 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 OSBP2Q969R2 916 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 DDX11Q96FC9 970 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 PGBD1Q96JS3 809 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 LRRC2Q9BYS8 371 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 DACT1Q9NYF0 836 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 RCOR1Q9UKL0 485 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 GNEQ9Y223 722 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
SF3B6-202ENST00000478050 MYH2Q9UKX2 1941 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 BCL9O00512 1426 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 C10orf71Q711Q0 1435 aa5.74□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF831Q5JPB2 1677 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CARMIL3Q8ND23 1372 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 ZBTB42B2RXF5 422 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 ERVV-1B6SEH8 477 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 TGFBR3LH3BV60 316 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 M0R2N6 131 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 DYNC1I1O14576 645 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 PDE8AO60658 829 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 DTNBO60941 627 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CTDNEP1O95476 244 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 UQCRFS1P1P0C7P4 283 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 RARAP10276 462 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 HSPA8P11142 646 aaKnown RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 EIF2AK2P19525 551 aaKnown RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 ZAP70P43403 619 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CTSWP56202 376 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CCT2P78371 535 aaKnown RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 FKBP4Q02790 459 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 NOLC1Q14978 699 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 DDB1Q16531 1140 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 ANO6Q4KMQ2 910 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 METTL24Q5JXM2 366 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CCDC73Q6ZRK6 1079 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 HFE2Q6ZVN8 426 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 RALYLQ86SE5 291 aaKnown RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 MB21D2Q8IYB1 491 aaPredicted RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 TSEN2Q8NCE0 465 aaKnown RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 SLC17A8Q8NDX2 589 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 NCOA7Q8NI08 942 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 PIGBQ92521 554 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 FAM89AQ96GI7 184 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 PRIMPOLQ96LW4 560 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 MAP7D2Q96T17 732 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CBX8Q9HC52 389 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 CNNM1Q9NRU3 951 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 SPTLC3Q9NUV7 552 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 KIAA1024Q9UPX6 916 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 RIPOR2Q9Y4F9 1068 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 COL5A3P25940 1745 aaPredicted RBP5.73□□□□□ -1.49
SF3B6-202ENST00000478050 ZMYM6O95789 1325 aa5.73□□□□□ -1.49
SF3B6-202ENST00000478050 UQCRHLA0A096LP55 91 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF213O14771 459 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 DHX15O43143 795 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 GPAA1O43292 621 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 PRC1O43663 620 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 KINO60870 393 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 FGAP02671 866 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 UQCRHP07919 91 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 CYP19A1P11511 503 aaPredicted RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 TARSP26639 723 aaKnown RBP5.72□□□□□ -1.49
SF3B6-202ENST00000478050 CDC25BP30305 580 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 ADD2P35612 726 aa5.72□□□□□ -1.49
SF3B6-202ENST00000478050 IL6STP40189 918 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms