RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 HMX1Q9NP08 348 aaPredicted RBP6.72□□□□□ -1.33
TRA2B-211ENST00000477939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRA2B-211ENST00000477939 IKBKGQ9Y6K9 419 aa6.72□□□□□ -1.33
TRA2B-211ENST00000477939 MORC2Q9Y6X9 1032 aaPredicted RBP6.72□□□□□ -1.33
TRA2B-211ENST00000477939 PFASO15067 1338 aa6.72□□□□□ -1.33
TRA2B-211ENST00000477939 TCRBV5S4A2TA0A5A2 114 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PABPN1LA6NDY0 278 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SOX1O00570 391 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 HARSP12081 509 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 TNNT1P13805 278 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 ZKSCAN1P17029 563 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 RPL17P18621 184 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SH3BGRP55822 239 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PRPF4BQ13523 1007 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 KRT72Q14CN4 511 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 ABCB5Q2M3G0 1257 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 CERKLQ49MI3 558 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 ACBD5Q5T8D3 534 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SLC9C2Q5TAH2 1124 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 LARP1BQ659C4 914 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 LBX2Q6XYB7 198 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PCGF5Q86SE9 256 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SDCCAG8Q86SQ7 713 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 DRC7Q8IY82 874 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 C7orf61Q8IZ16 206 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 LCORLQ8N3X6 602 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SLC44A5Q8NCS7 719 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 CCDC26Q8TAB7 109 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 FAM76AQ8TAV0 307 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 GTF3C2Q8WUA4 911 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 SDR42E1Q8WUS8 393 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 TCP11Q8WWU5 503 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PMM1Q92871 262 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 MAK16Q9BXY0 300 aaKnown RBP6.71□□□□□ -1.34
TRA2B-211ENST00000477939 ITGB1BP2Q9UKP3 347 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 BLOC1S6Q9UL45 172 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 OGDHLQ9ULD0 1010 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 ZNF532Q9HCE3 1301 aa6.71□□□□□ -1.34
TRA2B-211ENST00000477939 GREB1LQ9C091 1923 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 A0A1W2PPC1 479 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SPDYE16A6NNV3 312 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L15C9J2P7 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L13C9JLJ4 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L11C9JVI0 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L18D6R9N7 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L22D6RA61 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L17D6RBQ6 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L19D6RCP7 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L20D6RJB6 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 E2F6O75461 281 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SMC2O95347 1197 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 OATP04181 439 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CHGBP05060 677 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CYP2D6P10635 497 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 COL6A1P12109 1028 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CCND3P30281 292 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 MAN1A1P33908 653 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 RGS2P41220 211 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 NASPP49321 788 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP14P54578 494 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 USP17L24Q0WX57 530 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SEPT2Q15019 361 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 TTF1Q15361 905 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 DBN1Q16643 649 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SLC5A9Q2M3M2 681 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CCDC174Q6PII3 467 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CATSPERGQ6ZRH7 1159 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 SEPT14Q6ZU15 432 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 PLEKHH3Q7Z736 793 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 TTC6Q86TZ1 520 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CLEC10AQ8IUN9 316 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CLASRPQ8N2M8 674 aaKnown RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 UBXN4Q92575 508 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 KIF1BPQ96EK5 621 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 LRCH3Q96II8 777 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 MPP4Q96JB8 637 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 GDF15Q99988 308 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 CRNKL1Q9BZJ0 848 aaKnown RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 FAM107BQ9H098 131 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 C11orf49Q9H6J7 331 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 RPAP3Q9H6T3 665 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-211ENST00000477939 ZBTB40Q9NUA8 1239 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 EXOC1Q9NV70 894 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 FLRT1Q9NZU1 646 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 BTBD7Q9P203 1132 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 STAP2Q9UGK3 403 aa6.7□□□□□ -1.34
TRA2B-211ENST00000477939 ZMYND8Q9ULU4 1186 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms