RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TCEAL5Q5H9L2 206 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 TAPT1Q6NXT6 567 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 DBNLQ9UJU6 430 aaKnown RBP11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 KMT2EQ8IZD2 1858 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
SMARCB1-206ENST00000477836 BCAR3O75815 825 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 ID4P47928 161 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 CDK8P49336 464 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 TMED8Q6PL24 325 aaPredicted RBP11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 MTG1Q9BT17 334 aaPredicted RBP11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 CCDC8Q9H0W5 538 aaPredicted RBP11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 DNAH14Q0VDD8 3507 aa11.65□□□□□ -0.54
SMARCB1-206ENST00000477836 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 CPT1AP50416 773 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 SMAD2Q15796 467 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 ASCL5Q7RTU5 278 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 LCORLQ8N3X6 602 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 FBXL6Q8N531 539 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 ALG13Q9NP73 1137 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 A1CFQ9NQ94 594 aaKnown RBP11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 GTF3C3Q9Y5Q9 886 aa11.64□□□□□ -0.55
SMARCB1-206ENST00000477836 PLXNA3P51805 1871 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 F5H6K3 240 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 H0Y858 1186 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 STXBP3O00186 592 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 MBTPS2O43462 519 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 NDUFB10O96000 172 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 GNAI2P04899 355 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 LTBRP36941 435 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 OAZ1P54368 228 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 KLRC3Q07444 240 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 GPNMBQ14956 572 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 TCTN1Q2MV58 587 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 EPC2Q52LR7 807 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 NFRKBQ6P4R8 1299 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 INSL6Q9Y581 213 aa11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
SMARCB1-206ENST00000477836 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 ABHD14A-ACY1A0A1B0GW23 586 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 RBAK-RBAKDNI3L0D1 243 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 PRKAB2O43741 272 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 KRT37O76014 449 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 PDE6AP16499 860 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 ZXDAP98168 799 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 GPM6BQ13491 265 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 OR6J1Q8NGC5 347 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 ARMT1Q9H993 441 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 VTA1Q9NP79 307 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 BAZ2AQ9UIF9 1905 aaKnown RBP11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 FRYLO94915 3013 aa11.62□□□□□ -0.55
SMARCB1-206ENST00000477836 ZNF532Q9HCE3 1301 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 SCN10AQ9Y5Y9 1956 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 PROB1E7EW31 1015 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 H3BNC9 293 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 NBNO60934 754 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 SELPP16109 830 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 PTPN11Q06124 597 aaPredicted RBP11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 DLX2Q07687 328 aaPredicted RBP11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 IKBKEQ14164 716 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 PTGISQ16647 500 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 AMOTL1Q8IY63 956 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 CAGE1Q8TC20 777 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
SMARCB1-206ENST00000477836 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms