RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CNGB1Q14028 1251 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 DCTN1Q14203 1278 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 MAP1SQ66K74 1059 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 MCM10Q7L590 875 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 CCNJLQ8IV13 435 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 GALNT12Q8IXK2 581 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 TRIM56Q9BRZ2 755 aaKnown RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 EHD4Q9H223 541 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 MKNK2Q9HBH9 465 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 EGFL7Q9UHF1 273 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 RNF123Q5XPI4 1314 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 RASSF10A6NK89 507 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 LEFTY1O75610 366 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 KRT1P04264 644 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 NPR1P16066 1061 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 EPHX2P34913 555 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 CTCFP49711 727 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-207ENST00000477676 ST5P78524 1137 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 PDE3AQ14432 1141 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 SPRED3Q2MJR0 410 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 CCDC93Q567U6 631 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 EAPPQ56P03 285 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-207ENST00000477676 FYB2Q5VWT5 728 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 PRR23BQ6ZRT6 265 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-207ENST00000477676 GLYCTKQ8IVS8 523 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 SYNE4Q8N205 404 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 CCDC82Q8N4S0 544 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 CITED4Q96RK1 184 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 MIS18AQ9NYP9 233 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 NIP7Q9Y221 180 aaKnown RBP eCLIP6.13□□□□□ -1.43
CKS1B-207ENST00000477676 COL4A1P02462 1669 aa6.13□□□□□ -1.43
CKS1B-207ENST00000477676 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 POLR3DP05423 398 aaPredicted RBP6.12□□□□□ -1.43
CKS1B-207ENST00000477676 CEACAM5P06731 702 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 IARSP41252 1262 aaKnown RBP6.12□□□□□ -1.43
CKS1B-207ENST00000477676 SCN9AQ15858 1988 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 CRY2Q49AN0 593 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 CST9Q5W186 159 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 UBN2Q6ZU65 1347 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 CNTROBQ8N137 903 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 PIDD1Q9HB75 910 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 HACL1Q9UJ83 578 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
CKS1B-207ENST00000477676 AKAP11Q9UKA4 1901 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 A0A1W2PP55 124 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 TRAF5O00463 557 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 CPNE3O75131 537 aaKnown RBP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 SNRPA1P09661 255 aaKnown RBP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 EPS15P42566 896 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 GRIA4P48058 902 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 PTPN12Q05209 780 aaKnown RBP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 DEFB115Q30KQ5 88 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 KIAA0319Q5VV43 1072 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
CKS1B-207ENST00000477676 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
CKS1B-207ENST00000477676 DUOX1Q9NRD9 1551 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 NPHP1O15259 732 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 ICMTO60725 284 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 TPTE2Q6XPS3 522 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 LRP10Q7Z4F1 713 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 RTKN2Q8IZC4 609 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 GPC2Q8N158 579 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 TCF12Q99081 682 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 PSMD1Q99460 953 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 ANO2Q9NQ90 1003 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 JAG2Q9Y219 1238 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
CKS1B-207ENST00000477676 PSME4Q14997 1843 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 NFIBO00712 420 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 NTSR2O95665 410 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 B3GALT4O96024 378 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 INHBBP09529 407 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 GPTP24298 496 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 PPP2R1AP30153 589 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 AFMP43652 599 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 ZP2Q05996 745 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 PPP2R3AQ06190 1150 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 ZNF211Q13398 564 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 TAF7Q15545 349 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 RPS26P11Q5JNZ5 115 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 SUSD4Q5VX71 490 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms