RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-206ENST00000477546 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 MYH1P12882 1939 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 SMPD1P17405 629 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 CTC1Q2NKJ3 1217 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
TRAIP-206ENST00000477546 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 ABHD14A-ACY1A0A1B0GW23 586 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 HMMRO75330 724 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 CYP7A1P22680 504 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 PTGS1P23219 599 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 CLUL1Q15846 466 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 TNNI3KQ59H18 835 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 CNKSR3Q6P9H4 555 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 SAMD11Q96NU1 681 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 SNRKQ9NRH2 765 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 EXOC6BQ9Y2D4 811 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 FPGT-TNNI3KV9GXZ4 949 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
TRAIP-206ENST00000477546 H3BNC9 293 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 EFCAB14O75071 495 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-206ENST00000477546 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-206ENST00000477546 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
TRAIP-206ENST00000477546 EPC2Q52LR7 807 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 POLR3EQ9NVU0 708 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 FBXO40Q9UH90 709 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
TRAIP-206ENST00000477546 MCM3APO60318 1980 aa12.49□□□□□ -0.41
TRAIP-206ENST00000477546 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
TRAIP-206ENST00000477546 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-206ENST00000477546 GPNMBQ14956 572 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 IQSEC1Q6DN90 963 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-206ENST00000477546 ACACBO00763 2458 aa12.48□□□□□ -0.41
TRAIP-206ENST00000477546 ASB14A6NK59 587 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 PARNO95453 639 aaKnown RBP12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CXCL10P02778 98 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 GPM6BQ13491 265 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CBX2Q14781 532 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-206ENST00000477546 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 FAM117BQ6P1L5 589 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 FRMD5Q7Z6J6 570 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CHST13Q8NET6 341 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CAGE1Q8TC20 777 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-206ENST00000477546 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 DBNDD2Q9BQY9 259 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-206ENST00000477546 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 CD207Q9UJ71 328 aa12.47□□□□□ -0.41
TRAIP-206ENST00000477546 TBX10O75333 385 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
TRAIP-206ENST00000477546 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAIP-206ENST00000477546 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.41
TRAIP-206ENST00000477546 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.41
TRAIP-206ENST00000477546 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 NOD1Q9Y239 953 aa12.46□□□□□ -0.41
TRAIP-206ENST00000477546 EYA4O95677 639 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 EEF2P13639 858 aaKnown RBP12.45□□□□□ -0.42
TRAIP-206ENST00000477546 AKR1B1P15121 316 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 SELPP16109 830 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 CPT1AP50416 773 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-206ENST00000477546 EVX2Q03828 476 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 HYAL1Q12794 435 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 LRRC8DQ7L1W4 858 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 AACSQ86V21 672 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 CPXCR1Q8N123 301 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-206ENST00000477546 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
TRAIP-206ENST00000477546 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms