RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 CPA4Q9UI42 421 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 RABGAP1Q9Y3P9 1069 aa10.66□□□□□ -0.7
PGK1-204ENST00000477335 BCRP11274 1271 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 HSD17B4P51659 736 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 ERVK-24P63145 666 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 GHRHRQ02643 423 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 SREBF2Q12772 1141 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
PGK1-204ENST00000477335 NOSTRINQ8IVI9 506 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 ANKRD13CQ8N6S4 541 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 PARK7Q99497 189 aaKnown RBP10.65□□□□□ -0.7
PGK1-204ENST00000477335 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
PGK1-204ENST00000477335 FOXP1Q9H334 677 aaPredicted RBP10.65□□□□□ -0.7
PGK1-204ENST00000477335 C6orf50Q9HD87 102 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
PGK1-204ENST00000477335 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
PGK1-204ENST00000477335 LCTP09848 1927 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 ASTN1O14525 1302 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 CFBP00751 764 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 XBP1P17861 261 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 ERCC3P19447 782 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 CALML3P27482 149 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 INHBEP58166 350 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 C1QTNF8P60827 252 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 CAP1Q01518 475 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 DNM1Q05193 864 aaKnown RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 CRHR2Q13324 411 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 C17orf99Q6UX52 265 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 PIK3AP1Q6ZUJ8 805 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 FAM177A1Q8N128 213 aaPredicted RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 SYTL5Q8TDW5 730 aaPredicted RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 CCDC12Q8WUD4 166 aaPredicted RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 CUL5Q93034 780 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 EFCC1Q9HA90 598 aa10.64□□□□□ -0.71
PGK1-204ENST00000477335 ZCCHC17Q9NP64 241 aaKnown RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 A1CFQ9NQ94 594 aaKnown RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 CTDP1Q9Y5B0 961 aaPredicted RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 DDX49Q9Y6V7 483 aaKnown RBP10.64□□□□□ -0.71
PGK1-204ENST00000477335 RBBP6Q7Z6E9 1792 aaKnown RBP10.63□□□□□ -0.71
PGK1-204ENST00000477335 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 HSPA6P17066 643 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 CTGFP29279 349 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 GNA11P29992 359 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
PGK1-204ENST00000477335 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
PGK1-204ENST00000477335 BAATQ14032 418 aaPredicted RBP10.63□□□□□ -0.71
PGK1-204ENST00000477335 SAFBQ15424 915 aaKnown RBP eCLIP10.63□□□□□ -0.71
PGK1-204ENST00000477335 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 REXO1Q8N1G1 1221 aaKnown RBP10.63□□□□□ -0.71
PGK1-204ENST00000477335 GPRC5AQ8NFJ5 357 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 FGD4Q96M96 766 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 USP28Q96RU2 1077 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 CYP39A1Q9NYL5 469 aa10.63□□□□□ -0.71
PGK1-204ENST00000477335 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 CA12O43570 354 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 TLR2O60603 784 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 UBXN2AP68543 259 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 CNTN2Q02246 1040 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 FAM110CQ1W6H9 321 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 INF2Q27J81 1249 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
PGK1-204ENST00000477335 BRAPQ7Z569 592 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 FCHSD1Q86WN1 690 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 CHST13Q8NET6 341 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 IL31RAQ8NI17 732 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 TBCKQ8TEA7 893 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 TAAR1Q96RJ0 339 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 ANO3Q9BYT9 981 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 ZSCAN16Q9H4T2 348 aaPredicted RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 RNF186Q9NXI6 227 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
PGK1-204ENST00000477335 CNPY2Q9Y2B0 182 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 PCDHB6Q9Y5E3 794 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 CLIC4Q9Y696 253 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 MRVI1Q9Y6F6 885 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 ZSWIM8A7E2V4 1837 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
PGK1-204ENST00000477335 FRMPD4Q14CM0 1322 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 BAG4O95429 457 aaKnown RBP10.61□□□□□ -0.71
PGK1-204ENST00000477335 TBC1D8O95759 1140 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 SLC25A27O95847 323 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
PGK1-204ENST00000477335 MAP2K2P36507 400 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 TRAF1Q13077 416 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 AP3B2Q13367 1082 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms