RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
COL4A6-206ENST00000477085 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
COL4A6-206ENST00000477085 GRPEL1Q9HAV7 217 aa16.42■□□□□ 0.22
COL4A6-206ENST00000477085 ADAMTS5Q9UNA0 930 aa16.42■□□□□ 0.22
COL4A6-206ENST00000477085 RLFQ13129 1914 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 IRF6O14896 467 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 POLR2DO15514 142 aaKnown RBP16.41■□□□□ 0.22
COL4A6-206ENST00000477085 NEMFO60524 1076 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL4A6-206ENST00000477085 CDC25AP30304 524 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 NF2P35240 595 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 TREML2Q5T2D2 321 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 PPP4R3AQ6IN85 833 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 CPXCR1Q8N123 301 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 CCPG1Q9ULG6 757 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 ABCB11O95342 1321 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 A0A087WWV3 80 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 CFBP00751 764 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 DSG3P32926 999 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 PRPHP41219 470 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
COL4A6-206ENST00000477085 LDLRAD1Q5T700 205 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
COL4A6-206ENST00000477085 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 TMOD4Q9NZQ9 345 aa16.41■□□□□ 0.22
COL4A6-206ENST00000477085 MRPL11Q9Y3B7 192 aaKnown RBP16.41■□□□□ 0.22
COL4A6-206ENST00000477085 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 LAD1O00515 517 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 NFIBO00712 420 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 CTAGE5O15320 804 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 FOXN1O15353 648 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
COL4A6-206ENST00000477085 PPATQ06203 517 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 TRAF1Q13077 416 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 MUM1L1Q5H9M0 696 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 KRBA2Q6ZNG9 492 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 PDILTQ8N807 584 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 SERTAD1Q9UHV2 236 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
COL4A6-206ENST00000477085 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
COL4A6-206ENST00000477085 CYP3A7P24462 503 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 LONP1P36776 959 aaKnown RBP16.39■□□□□ 0.21
COL4A6-206ENST00000477085 SREBF1P36956 1147 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 USP11P51784 963 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 TYRO3Q06418 890 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
COL4A6-206ENST00000477085 COG2Q14746 738 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 HAS1Q92839 578 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 GJA10Q969M2 543 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 MBOAT7Q96N66 472 aa16.39■□□□□ 0.21
COL4A6-206ENST00000477085 GCOM1H8Y6P7 765 aaPredicted RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 GJA5P36382 358 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 MRE11P49959 708 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 MOGSQ13724 837 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 RNF214Q8ND24 703 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 MYH7BA7E2Y1 1941 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 ZBED4O75132 1171 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 ALAS1P13196 640 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 TECP42680 631 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 HSD17B4P51659 736 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 E2F4Q16254 413 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 CALCRLQ16602 461 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 ARMC9Q7Z3E5 817 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
COL4A6-206ENST00000477085 KCNH4Q9UQ05 1017 aa16.38■□□□□ 0.21
COL4A6-206ENST00000477085 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
COL4A6-206ENST00000477085 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 PEX10O60683 326 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 TXKP42681 527 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 GHRHRQ02643 423 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 PNOCQ13519 176 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 MCTP2Q6DN12 878 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 GRAMD1CQ8IYS0 662 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms