RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ZNF467Q7Z7K2 595 aaPredicted RBP34.11■■■■□ 3.05
HOXB3-208ENST00000476342 SAMD3Q8N6K7 520 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 PHKBQ93100 1093 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 ZNF333Q96JL9 665 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 MAP3K20Q9NYL2 800 aaKnown RBP34.11■■■■□ 3.05
HOXB3-208ENST00000476342 LCTP09848 1927 aa34.1■■■■□ 3.05
HOXB3-208ENST00000476342 CFBP00751 764 aa34.1■■■■□ 3.05
HOXB3-208ENST00000476342 CNTN2Q02246 1040 aa34.1■■■■□ 3.05
HOXB3-208ENST00000476342 MSL3Q8N5Y2 521 aaKnown RBP34.1■■■■□ 3.05
HOXB3-208ENST00000476342 SLC26A6Q9BXS9 759 aa34.1■■■■□ 3.05
HOXB3-208ENST00000476342 ADD3Q9UEY8 706 aaKnown RBP34.1■■■■□ 3.05
HOXB3-208ENST00000476342 LARGE1O95461 756 aa34.09■■■■□ 3.05
HOXB3-208ENST00000476342 PFKFB3Q16875 520 aaPredicted RBP34.09■■■■□ 3.05
HOXB3-208ENST00000476342 GTF3C6Q969F1 213 aa34.09■■■■□ 3.05
HOXB3-208ENST00000476342 ZSCAN31Q96LW9 406 aaPredicted RBP34.09■■■■□ 3.05
HOXB3-208ENST00000476342 OPLAHO14841 1288 aa34.08■■■■□ 3.05
HOXB3-208ENST00000476342 SSRP1Q08945 709 aaKnown RBP34.08■■■■□ 3.05
HOXB3-208ENST00000476342 GPKOWQ92917 476 aaPredicted RBP eCLIP34.08■■■■□ 3.059e-6■■□□□ 14.5
HOXB3-208ENST00000476342 TINF2Q9BSI4 451 aa34.08■■■■□ 3.05
HOXB3-208ENST00000476342 SCG2P13521 617 aa34.07■■■■□ 3.04
HOXB3-208ENST00000476342 GHRHRQ02643 423 aa34.07■■■■□ 3.04
HOXB3-208ENST00000476342 WWC2Q6AWC2 1192 aa34.07■■■■□ 3.04
HOXB3-208ENST00000476342 TBC1D5Q92609 795 aa34.07■■■■□ 3.04
HOXB3-208ENST00000476342 HSD17B4P51659 736 aa34.06■■■■□ 3.04
HOXB3-208ENST00000476342 PPP1R18Q6NYC8 613 aa34.06■■■■□ 3.04
HOXB3-208ENST00000476342 MAMDC4Q6UXC1 1216 aa34.06■■■■□ 3.04
HOXB3-208ENST00000476342 FGD4Q96M96 766 aa34.06■■■■□ 3.04
HOXB3-208ENST00000476342 SYNGAP1Q96PV0 1343 aa34.06■■■■□ 3.04
HOXB3-208ENST00000476342 ASB14A6NK59 587 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 GCOM1H8Y6P7 765 aaPredicted RBP34.05■■■■□ 3.04
HOXB3-208ENST00000476342 IGHA2P01877 340 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 POLR2MP0CAP2 368 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 PRKAR2AP13861 404 aaKnown RBP34.05■■■■□ 3.04
HOXB3-208ENST00000476342 CYP2C19P33261 490 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 NAPAP54920 295 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 NECAB1Q8N987 351 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 DNERQ8NFT8 737 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 SH2B1Q9NRF2 756 aaPredicted RBP34.05■■■■□ 3.04
HOXB3-208ENST00000476342 BARHL2Q9NY43 387 aa34.05■■■■□ 3.04
HOXB3-208ENST00000476342 SOWAHBA6NEL2 793 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 PPFIA3O75145 1194 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 CACNB2Q08289 660 aaPredicted RBP34.04■■■■□ 3.04
HOXB3-208ENST00000476342 TRIM32Q13049 653 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 SYTL5Q8TDW5 730 aaPredicted RBP34.04■■■■□ 3.04
HOXB3-208ENST00000476342 CUL5Q93034 780 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 MPHOSPH6Q99547 160 aaKnown RBP34.04■■■■□ 3.04
HOXB3-208ENST00000476342 LOC102724159A0A0B4J2E5 919 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 DEXIO95424 95 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 MCM2P49736 904 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 PWP2Q15269 919 aaKnown RBP34.04■■■■□ 3.04
HOXB3-208ENST00000476342 MAP3K21Q5TCX8 1036 aa34.04■■■■□ 3.04
HOXB3-208ENST00000476342 MCM3APO60318 1980 aa34.03■■■■□ 3.04
HOXB3-208ENST00000476342 ALDH5A1P51649 535 aaPredicted RBP34.03■■■■□ 3.04
HOXB3-208ENST00000476342 PKN1Q16512 942 aa34.03■■■■□ 3.04
HOXB3-208ENST00000476342 CCDC12Q8WUD4 166 aaPredicted RBP34.03■■■■□ 3.04
HOXB3-208ENST00000476342 PURBQ96QR8 312 aaKnown RBP34.03■■■■□ 3.04
HOXB3-208ENST00000476342 PSTPIP2Q9H939 334 aa34.03■■■■□ 3.04
HOXB3-208ENST00000476342 RPTORQ8N122 1335 aa34.03■■■■□ 3.04
HOXB3-208ENST00000476342 STXBP3O00186 592 aa34.02■■■■□ 3.04
HOXB3-208ENST00000476342 MYCP01106 439 aaPredicted RBP34.02■■■■□ 3.04
HOXB3-208ENST00000476342 HMX1Q9NP08 348 aaPredicted RBP34.02■■■■□ 3.04
HOXB3-208ENST00000476342 NRBP1Q9UHY1 535 aa34.02■■■■□ 3.04
HOXB3-208ENST00000476342 CNPY2Q9Y2B0 182 aa34.02■■■■□ 3.04
HOXB3-208ENST00000476342 STK36Q9NRP7 1315 aa34.02■■■■□ 3.04
HOXB3-208ENST00000476342 B4DLN1 442 aa34.01■■■■□ 3.03
HOXB3-208ENST00000476342 MRPL12P52815 198 aaKnown RBP34.01■■■■□ 3.03
HOXB3-208ENST00000476342 MTFR1Q15390 333 aa34.01■■■■□ 3.03
HOXB3-208ENST00000476342 ARMCX2Q7L311 632 aa34.01■■■■□ 3.03
HOXB3-208ENST00000476342 ASTN1O14525 1302 aa34.01■■■■□ 3.03
HOXB3-208ENST00000476342 PIK3CDO00329 1044 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 CCL5P13501 91 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 HOXA13P31271 388 aaPredicted RBP34■■■■□ 3.03
HOXB3-208ENST00000476342 TEX2Q8IWB9 1127 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 SMARCC2Q8TAQ2 1214 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 GLT8D2Q9H1C3 349 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 COL20A1Q9P218 1284 aa34■■■■□ 3.03
HOXB3-208ENST00000476342 TYW1BQ6NUM6 668 aa33.99■■■■□ 3.03
HOXB3-208ENST00000476342 NSUN6Q8TEA1 469 aaKnown RBP33.99■■■■□ 3.03
HOXB3-208ENST00000476342 RMDN3Q96TC7 470 aa33.99■■■■□ 3.03
HOXB3-208ENST00000476342 TMEM106CQ9BVX2 250 aa33.99■■■■□ 3.03
HOXB3-208ENST00000476342 RNF208Q9H0X6 261 aa33.99■■■■□ 3.03
HOXB3-208ENST00000476342 UNC93B1Q9H1C4 597 aa33.99■■■■□ 3.03
HOXB3-208ENST00000476342 CDKN2AIPQ9NXV6 580 aaPredicted RBP33.99■■■■□ 3.03
HOXB3-208ENST00000476342 CTDNEP1O95476 244 aa33.98■■■■□ 3.03
HOXB3-208ENST00000476342 CYBAP13498 195 aa33.98■■■■□ 3.03
HOXB3-208ENST00000476342 CCDC148Q8NFR7 591 aa33.98■■■■□ 3.03
HOXB3-208ENST00000476342 TAAR1Q96RJ0 339 aa33.98■■■■□ 3.03
HOXB3-208ENST00000476342 ADCY7P51828 1080 aa33.97■■■■□ 3.03
HOXB3-208ENST00000476342 FCHSD1Q86WN1 690 aa33.97■■■■□ 3.03
HOXB3-208ENST00000476342 CCDC83Q8IWF9 413 aa33.97■■■■□ 3.03
HOXB3-208ENST00000476342 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.97■■■■□ 3.03
HOXB3-208ENST00000476342 ABHD16BQ9H3Z7 469 aa33.97■■■■□ 3.03
HOXB3-208ENST00000476342 RIC8AQ9NPQ8 531 aa33.97■■■■□ 3.03
HOXB3-208ENST00000476342 SMCO2A6NFE2 343 aa33.96■■■■□ 3.03
HOXB3-208ENST00000476342 CCDC85CA6NKD9 419 aa33.96■■■■□ 3.03
HOXB3-208ENST00000476342 MEIS2O14770 477 aa33.96■■■■□ 3.03
HOXB3-208ENST00000476342 SNAI1O95863 264 aaPredicted RBP33.96■■■■□ 3.03
HOXB3-208ENST00000476342 ARHGEF16Q5VV41 709 aa33.96■■■■□ 3.03
HOXB3-208ENST00000476342 USP17L6PQ6QN14 398 aa33.96■■■■□ 3.03
HOXB3-208ENST00000476342 NSUN7Q8NE18 718 aaKnown RBP33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms