RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
CALD1-217ENST00000475772 PRDM1O75626 825 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 RAG1P15918 1043 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 COPB2P35606 906 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 USP46P62068 366 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
CALD1-217ENST00000475772 SPIRE2Q8WWL2 714 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 APPBP2Q92624 585 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 DCTPP1Q9H773 170 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 SLC38A10Q9HBR0 1119 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 STARD7Q9NQZ5 370 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
CALD1-217ENST00000475772 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 M0R2C6 588 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
CALD1-217ENST00000475772 GPAA1O43292 621 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 TIMP1P01033 207 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 GRIN2CQ14957 1233 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
CALD1-217ENST00000475772 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 DDX11Q96FC9 970 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
CALD1-217ENST00000475772 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.41
CALD1-217ENST00000475772 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.46□□□□□ -0.41
CALD1-217ENST00000475772 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 TBX21Q9UL17 535 aa12.46□□□□□ -0.41
CALD1-217ENST00000475772 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 HOXA2O43364 376 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 ZBED4O75132 1171 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 NR1I2O75469 434 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 ASGR1P07306 291 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 CST5P28325 142 aaPredicted RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 GJA9P57773 515 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 FPGSQ05932 587 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 RCAN3Q9UKA8 241 aa12.45□□□□□ -0.42
CALD1-217ENST00000475772 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
CALD1-217ENST00000475772 ASTN1O14525 1302 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 ZNF536O15090 1300 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.44□□□□□ -0.42
CALD1-217ENST00000475772 DCDC2CA8MYV0 355 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 PTGS1P23219 599 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 NKX3-2P78367 333 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 CNTN2Q02246 1040 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 TMEM240Q5SV17 173 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 MFSD5Q6N075 450 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 ARMCX2Q7L311 632 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
CALD1-217ENST00000475772 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 NEDD1Q8NHV4 660 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 ABHD16BQ9H3Z7 469 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
CALD1-217ENST00000475772 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 LCTP09848 1927 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
CALD1-217ENST00000475772 ELP1O95163 1332 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 GBF1Q92538 1859 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 TMEM265A0A087WTH1 108 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 ARVCFO00192 962 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 FOXP2O15409 715 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
CALD1-217ENST00000475772 FOSL2P15408 326 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 CCDC144CPQ8IYA2 1237 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 FAM133AQ8N9E0 248 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 GMCL1P1Q8NEA9 526 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 CHST13Q8NET6 341 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 HLA-CQ95604 372 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
CALD1-217ENST00000475772 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
CALD1-217ENST00000475772 TTLL1O95922 423 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 CD4P01730 458 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
CALD1-217ENST00000475772 ACRP10323 421 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 BMP3P12645 472 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 CSF2RAP15509 400 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 TDO2P48775 406 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 OAZ1P54368 228 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 BEX3Q00994 111 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 TMEM63BQ5T3F8 832 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms