RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 FAM184BQ9ULE4 1060 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-211ENST00000475728 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
ABCF3-211ENST00000475728 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-211ENST00000475728 ZNF865P0CJ78 1059 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-211ENST00000475728 RARBP10826 455 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 RXRAP19793 462 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 BRF1Q92994 677 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 HTATIP2Q9BUP3 242 aa16.72■□□□□ 0.27
ABCF3-211ENST00000475728 ZHX1Q9UKY1 873 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-211ENST00000475728 DLL1O00548 723 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 CPA1P15085 419 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 ALDH5A1P51649 535 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-211ENST00000475728 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 UBE2Q1Q7Z7E8 422 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
ABCF3-211ENST00000475728 MORC4Q8TE76 937 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
ABCF3-211ENST00000475728 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
ABCF3-211ENST00000475728 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-211ENST00000475728 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABCF3-211ENST00000475728 GHRHRQ02643 423 aa16.7■□□□□ 0.26
ABCF3-211ENST00000475728 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
ABCF3-211ENST00000475728 NSUN6Q8TEA1 469 aaKnown RBP16.7■□□□□ 0.26
ABCF3-211ENST00000475728 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
ABCF3-211ENST00000475728 SZT2Q5T011 3432 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-211ENST00000475728 DNM1LO00429 736 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 CFBP00751 764 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 PDE4DQ08499 809 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 APOBRQ0VD83 1088 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 SYTL5Q8TDW5 730 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-211ENST00000475728 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 SPC25Q9HBM1 224 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 XPNPEP3Q9NQH7 507 aa16.69■□□□□ 0.26
ABCF3-211ENST00000475728 KBTBD13C9JR72 458 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 DUSP11O75319 330 aaKnown RBP16.68■□□□□ 0.26
ABCF3-211ENST00000475728 HSD17B4P51659 736 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 EVCP57679 992 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 CCDC144BQ3MJ40 725 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 RNF180Q86T96 592 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 TEX2Q8IWB9 1127 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 PAWRQ96IZ0 340 aaKnown RBP16.68■□□□□ 0.26
ABCF3-211ENST00000475728 RMDN3Q96TC7 470 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
ABCF3-211ENST00000475728 ASTN1O14525 1302 aa16.68■□□□□ 0.26
ABCF3-211ENST00000475728 NID2Q14112 1375 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 EDNRBP24530 442 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 IQSEC1Q6DN90 963 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
ABCF3-211ENST00000475728 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-211ENST00000475728 CUL5Q93034 780 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
ABCF3-211ENST00000475728 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
ABCF3-211ENST00000475728 KATNBL1Q9H079 304 aa16.67■□□□□ 0.26
ABCF3-211ENST00000475728 OPLAHO14841 1288 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 TNFAIP2Q03169 654 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 ANKRD1Q15327 319 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
ABCF3-211ENST00000475728 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
ABCF3-211ENST00000475728 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 TAAR1Q96RJ0 339 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 BRCA2P51587 3418 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
ABCF3-211ENST00000475728 TRIOBPQ9H2D6 2365 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 COL6A1P12109 1028 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 LRRC41Q15345 812 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 STXBP2Q15833 593 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 TSEN34Q9BSV6 310 aaKnown RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-211ENST00000475728 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 Q9Y3F1 56 aa16.65■□□□□ 0.26
ABCF3-211ENST00000475728 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 PIK3CDO00329 1044 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 CDC27P30260 824 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms