RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 SCYL3Q8IZE3 742 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 C4orf32Q8N8J7 132 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 FAM200AQ8TCP9 573 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 LPAR1Q92633 364 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 PICK1Q9NRD5 415 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
PCCB-213ENST00000475214 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 ZNF112Q9UJU3 913 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
PCCB-213ENST00000475214 NEMFO60524 1076 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 SNAP25P60880 206 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 AP3B2Q13367 1082 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 UBE2SQ16763 222 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 LONRF3Q496Y0 759 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
PCCB-213ENST00000475214 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 CDCA5Q96FF9 252 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
PCCB-213ENST00000475214 SERTAD1Q9UHV2 236 aa11.58□□□□□ -0.56
PCCB-213ENST00000475214 DOCK1Q14185 1865 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
PCCB-213ENST00000475214 FOSP01100 380 aaPredicted RBP11.57□□□□□ -0.56
PCCB-213ENST00000475214 OR52Z1P0C646 297 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 INPP5BP32019 993 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 ZNF165P49910 485 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 NLRP12P59046 1061 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 USH1GQ495M9 461 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
PCCB-213ENST00000475214 CEP57L1Q8IYX8 460 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 PDILTQ8N807 584 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 EPSTI1Q96J88 318 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 AK8Q96MA6 479 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 WDR18Q9BV38 432 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 DNAJC25Q9H1X3 360 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 RANBP17Q9H2T7 1088 aaKnown RBP11.57□□□□□ -0.56
PCCB-213ENST00000475214 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
PCCB-213ENST00000475214 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
PCCB-213ENST00000475214 USP11P51784 963 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 POSTNQ15063 836 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 IL17AQ16552 155 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 CCDC174Q6PII3 467 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 USP49Q70CQ1 688 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 PRPF38AQ8NAV1 312 aaKnown RBP11.56□□□□□ -0.56
PCCB-213ENST00000475214 DHX58Q96C10 678 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 MCOLN1Q9GZU1 580 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 TMEM60Q9H2L4 133 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 TUBE1Q9UJT0 475 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
PCCB-213ENST00000475214 ABCB11O95342 1321 aa11.56□□□□□ -0.56
PCCB-213ENST00000475214 SPDYE3A6NKU9 549 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 GOLGA6L19H0YKK7 550 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 MEIS2O14770 477 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 ACTN4O43707 911 aaKnown RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 MARCH6O60337 910 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 SMC2O95347 1197 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 SLC10A3P09131 477 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 SLFN14P0C7P3 912 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 PTPRAP18433 802 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 UBA7P41226 1012 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 PNOCQ13519 176 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 CALCRLQ16602 461 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 TMEM266Q2M3C6 531 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 NOL9Q5SY16 702 aaKnown RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 USP17L6PQ6QN14 398 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 ARMC9Q7Z3E5 817 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 ERCC4Q92889 916 aaPredicted RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 ZKSCAN4Q969J2 545 aaPredicted RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 PPP1R9BQ96SB3 815 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 RAB34Q9BZG1 259 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 CCSER1Q9C0I3 900 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
PCCB-213ENST00000475214 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
PCCB-213ENST00000475214 BECN2A8MW95 431 aa11.54□□□□□ -0.56
PCCB-213ENST00000475214 FAM155AB1AL88 458 aaPredicted RBP11.54□□□□□ -0.56
PCCB-213ENST00000475214 PIK3CDO00329 1044 aa11.54□□□□□ -0.56
PCCB-213ENST00000475214 TDP2O95551 362 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms