RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
VARS-223ENST00000474643 ARVCFO00192 962 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 ALDH5A1P51649 535 aaPredicted RBP17.65■□□□□ 0.42
VARS-223ENST00000474643 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
VARS-223ENST00000474643 FAAP100Q0VG06 881 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 ASPRV1Q53RT3 343 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 BRDTQ58F21 947 aaPredicted RBP17.65■□□□□ 0.42
VARS-223ENST00000474643 IFIT1BQ5T764 474 aaKnown RBP17.65■□□□□ 0.42
VARS-223ENST00000474643 CCSAPQ6IQ19 270 aaPredicted RBP17.65■□□□□ 0.42
VARS-223ENST00000474643 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 SLC30A10Q6XR72 485 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 KATNBL1Q9H079 304 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 ANO2Q9NQ90 1003 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 TNKSO95271 1327 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
VARS-223ENST00000474643 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 TIMP1P01033 207 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 PARP1P09874 1014 aaKnown RBP17.64■□□□□ 0.41
VARS-223ENST00000474643 SMPD1P17405 629 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
VARS-223ENST00000474643 TMEM199Q8N511 208 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 PURBQ96QR8 312 aaKnown RBP17.64■□□□□ 0.41
VARS-223ENST00000474643 WDR11Q9BZH6 1224 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 PPP1R12CQ9BZL4 782 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 PDGFCQ9NRA1 345 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 STXBP5LQ9Y2K9 1186 aa17.64■□□□□ 0.41
VARS-223ENST00000474643 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
VARS-223ENST00000474643 ERICH2A1L162 156 aa17.63■□□□□ 0.41
VARS-223ENST00000474643 SNHG28P0DPA3 235 aa17.63■□□□□ 0.41
VARS-223ENST00000474643 CPT1AP50416 773 aa17.63■□□□□ 0.41
VARS-223ENST00000474643 PPIGQ13427 754 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■□ 23.9
VARS-223ENST00000474643 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
VARS-223ENST00000474643 CDC37Q16543 378 aaPredicted RBP17.63■□□□□ 0.41
VARS-223ENST00000474643 RALYLQ86SE5 291 aaKnown RBP17.63■□□□□ 0.41
VARS-223ENST00000474643 OR6J1Q8NGC5 347 aa17.63■□□□□ 0.41
VARS-223ENST00000474643 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
VARS-223ENST00000474643 ITGB8P26012 769 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 RPS6P62753 249 aaKnown RBP17.62■□□□□ 0.41
VARS-223ENST00000474643 FAM109BQ6ICB4 259 aaPredicted RBP17.62■□□□□ 0.41
VARS-223ENST00000474643 ENAHQ8N8S7 591 aaPredicted RBP17.62■□□□□ 0.41
VARS-223ENST00000474643 DNERQ8NFT8 737 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 CPVLQ9H3G5 476 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
VARS-223ENST00000474643 Q9Y3F1 56 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 ASTN1O14525 1302 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 ABCB11O95342 1321 aa17.62■□□□□ 0.41
VARS-223ENST00000474643 MYL3P08590 195 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 SMAD3P84022 425 aaKnown RBP17.61■□□□□ 0.41
VARS-223ENST00000474643 ITGA7Q13683 1181 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
VARS-223ENST00000474643 DUSP28Q4G0W2 176 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 TAPT1Q6NXT6 567 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 MAP4K1Q92918 833 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 SEZ6LQ9BYH1 1024 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 TBX21Q9UL17 535 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 LAMA2P24043 3122 aaKnown RBP17.61■□□□□ 0.41
VARS-223ENST00000474643 LRRC37A2A6NM11 1700 aa17.61■□□□□ 0.41
VARS-223ENST00000474643 CYP21A2P08686 494 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 CHMP4BP1P59074 171 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 FAM47CQ5HY64 1035 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 PSRC1Q6PGN9 363 aaPredicted RBP17.6■□□□□ 0.41
VARS-223ENST00000474643 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 SCFD2Q8WU76 684 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 CLEC4DQ8WXI8 215 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 MTIF3Q9H2K0 278 aaKnown RBP17.6■□□□□ 0.41
VARS-223ENST00000474643 HIPK3Q9H422 1215 aa17.6■□□□□ 0.41
VARS-223ENST00000474643 MRPL11Q9Y3B7 192 aaKnown RBP17.6■□□□□ 0.41
VARS-223ENST00000474643 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.41
VARS-223ENST00000474643 CDK7P50613 346 aa17.59■□□□□ 0.41
VARS-223ENST00000474643 PSMC6P62333 389 aa17.59■□□□□ 0.41
VARS-223ENST00000474643 TTLL4Q14679 1199 aa17.59■□□□□ 0.41
VARS-223ENST00000474643 MORC4Q8TE76 937 aa17.59■□□□□ 0.41
VARS-223ENST00000474643 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
VARS-223ENST00000474643 COL6A3P12111 3177 aa17.59■□□□□ 0.41
VARS-223ENST00000474643 IFIT3O14879 490 aaKnown RBP17.58■□□□□ 0.4
VARS-223ENST00000474643 CTAGE5O15320 804 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 TXNP10599 105 aaKnown RBP17.58■□□□□ 0.4
VARS-223ENST00000474643 CSF2RAP15509 400 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 PTGS1P23219 599 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 CYP2C18P33260 490 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 EPHB4P54760 987 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 NKX3-2P78367 333 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 NCOA7Q8NI08 942 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
VARS-223ENST00000474643 E7EWF7 191 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 CFBP00751 764 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 ARHGEF16Q5VV41 709 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 RGS22Q8NE09 1264 aa17.57■□□□□ 0.4
VARS-223ENST00000474643 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms