RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GRB10Q13322 594 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 CDC37Q16543 378 aaPredicted RBP11.05□□□□□ -0.64
USP39-214ENST00000474572 UBE2SQ16763 222 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 HYIQ5T013 277 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
USP39-214ENST00000474572 SPECC1LQ69YQ0 1117 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 ZSCAN29Q8IWY8 852 aaPredicted RBP11.05□□□□□ -0.64
USP39-214ENST00000474572 AGBL3Q8NEM8 1001 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 PNMA5Q96PV4 448 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 ZNF70Q9UC06 446 aaPredicted RBP11.05□□□□□ -0.64
USP39-214ENST00000474572 PGAP2Q9UHJ9 254 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 CTNND2Q9UQB3 1225 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
USP39-214ENST00000474572 RBBP6Q7Z6E9 1792 aaKnown RBP11.04□□□□□ -0.64
USP39-214ENST00000474572 KIF2AO00139 706 aaPredicted RBP11.04□□□□□ -0.64
USP39-214ENST00000474572 MEIS2O14770 477 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 GH2P01242 217 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 TNNT1P13805 278 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 CDK11BP21127 795 aaKnown RBP11.04□□□□□ -0.64
USP39-214ENST00000474572 FECHP22830 423 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 TECP42680 631 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 PRCPP42785 496 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 USP11P51784 963 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 TGFB2P61812 414 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 ATP2B2Q01814 1243 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 TPD52L1Q16890 204 aaPredicted RBP11.04□□□□□ -0.64
USP39-214ENST00000474572 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 KLHL10Q6JEL2 608 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 NELFBQ8WX92 580 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 ANO3Q9BYT9 981 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 RAB34Q9BZG1 259 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 PSTPIP2Q9H939 334 aa11.04□□□□□ -0.64
USP39-214ENST00000474572 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 H7C1D1 291 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 CCP110O43303 1012 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 PLA2G6O60733 806 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 TUBB4AP04350 444 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 BMP3P12645 472 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 TNNI2P48788 182 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 STX17P56962 302 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 AMPD3Q01432 767 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 SF3B2Q13435 895 aaKnown RBP11.03□□□□□ -0.64
USP39-214ENST00000474572 DLGAP5Q15398 846 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 TTI2Q6NXR4 508 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
USP39-214ENST00000474572 HAS1Q92839 578 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
USP39-214ENST00000474572 PPP1R13BQ96KQ4 1090 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 C16orf45Q96MC5 204 aaPredicted RBP11.03□□□□□ -0.64
USP39-214ENST00000474572 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP39-214ENST00000474572 KCNMB3Q9NPA1 279 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
USP39-214ENST00000474572 LRWD1Q9UFC0 647 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 ZNRF3Q9ULT6 936 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 TMX2Q9Y320 296 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 PAXBP1Q9Y5B6 917 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
USP39-214ENST00000474572 PVALEFA0A1B0GWK0 134 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
USP39-214ENST00000474572 ARHGAP6O43182 974 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 TEX33O43247 280 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 STX10O60499 249 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 RAD17O75943 681 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 CCNE1P24864 410 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 CIITAP33076 1130 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 TXKP42681 527 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 COPB1P53618 953 aaKnown RBP11.02□□□□□ -0.65
USP39-214ENST00000474572 EHHADHQ08426 723 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 KRT31Q15323 416 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 PTPN14Q15678 1187 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 FILIP1LQ4L180 1135 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 UNC13DQ70J99 1090 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 FBXO11Q86XK2 927 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 IRF2BP1Q8IU81 584 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 RASSF8Q8NHQ8 419 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.65
USP39-214ENST00000474572 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 DDX25Q9UHL0 483 aaKnown RBP11.02□□□□□ -0.65
USP39-214ENST00000474572 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
USP39-214ENST00000474572 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms