RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 ACTL7BQ9Y614 415 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 EIF4BP23588 611 aaKnown RBP8.93□□□□□ -0.98
VPS50-211ENST00000474412 HOXA10P31260 410 aaPredicted RBP8.93□□□□□ -0.98
VPS50-211ENST00000474412 IARSP41252 1262 aaKnown RBP8.93□□□□□ -0.98
VPS50-211ENST00000474412 NFKBIBQ15653 356 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
VPS50-211ENST00000474412 NPAS4Q8IUM7 802 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 FAM9BQ8IZU0 186 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 FAM89AQ96GI7 184 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 MYD88Q99836 296 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 DBNDD2Q9BQY9 259 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 EMILIN2Q9BXX0 1053 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 CBX8Q9HC52 389 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 KRT82Q9NSB4 513 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 SAMM50Q9Y512 469 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 RNF123Q5XPI4 1314 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 SH3TC1Q8TE82 1336 aa8.93□□□□□ -0.98
VPS50-211ENST00000474412 FAM95CA0A1B0GW59 222 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 NME2P22392 152 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 ALDH1B1P30837 517 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 SLC10A5Q5PT55 438 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 SOGA3Q5TF21 947 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 PAOXQ6QHF9 649 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 Q8N3U1 123 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 CELF1Q92879 486 aaKnown RBP8.92□□□□□ -0.98
VPS50-211ENST00000474412 RBM17Q96I25 401 aaKnown RBP8.92□□□□□ -0.98
VPS50-211ENST00000474412 NECAB3Q96P71 396 aaPredicted RBP8.92□□□□□ -0.98
VPS50-211ENST00000474412 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 RNF112Q9ULX5 631 aa8.92□□□□□ -0.98
VPS50-211ENST00000474412 TTF2Q9UNY4 1162 aaKnown RBP8.92□□□□□ -0.98
VPS50-211ENST00000474412 SLFN14P0C7P3 912 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 ARNTP27540 789 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 ASPAP45381 313 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 CALD1Q05682 793 aaKnown RBP8.91□□□□□ -0.98
VPS50-211ENST00000474412 AOC3Q16853 763 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 TWISTNBQ3B726 338 aaPredicted RBP8.91□□□□□ -0.98
VPS50-211ENST00000474412 C16orf71Q8IYS4 520 aaPredicted RBP8.91□□□□□ -0.98
VPS50-211ENST00000474412 STK35Q8TDR2 534 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 WDR89Q96FK6 387 aaPredicted RBP8.91□□□□□ -0.98
VPS50-211ENST00000474412 GPR101Q96P66 508 aaPredicted RBP8.91□□□□□ -0.98
VPS50-211ENST00000474412 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
VPS50-211ENST00000474412 IL16Q14005 1332 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 ENC1O14682 589 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 ZNF862O60290 1169 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 IGKV5-2P06315 115 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 EXOSC9Q06265 439 aaKnown RBP8.9□□□□□ -0.98
VPS50-211ENST00000474412 CWF19L2Q2TBE0 894 aaKnown RBP8.9□□□□□ -0.98
VPS50-211ENST00000474412 MAP1SQ66K74 1059 aaPredicted RBP8.9□□□□□ -0.98
VPS50-211ENST00000474412 PDZD3Q86UT5 571 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 MFSD14AQ96MC6 490 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 PSMD1Q99460 953 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 PPP1R9AQ9ULJ8 1098 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 MAP3K2Q9Y2U5 619 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 ATP6V0A2Q9Y487 856 aa8.9□□□□□ -0.98
VPS50-211ENST00000474412 ZNF521Q96K83 1311 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 SYNGAP1Q96PV0 1343 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.89□□□□□ -0.99
VPS50-211ENST00000474412 FZD9O00144 591 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
VPS50-211ENST00000474412 TMPRSS2O15393 492 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 PPIP5K2O43314 1243 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 VEGFAP15692 232 aaPredicted RBP8.89□□□□□ -0.99
VPS50-211ENST00000474412 ID3Q02535 119 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 GRAPQ13588 217 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 MAP7Q14244 749 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 KIF4BQ2VIQ3 1234 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 CCDC30Q5VVM6 783 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 HOMEZQ8IX15 550 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 RTKN2Q8IZC4 609 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 GIMAP7Q8NHV1 300 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
VPS50-211ENST00000474412 METTL22Q9BUU2 404 aaPredicted RBP8.89□□□□□ -0.99
VPS50-211ENST00000474412 RNF19AQ9NV58 838 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
VPS50-211ENST00000474412 PI4KAP2A4QPH2 592 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 WDR64B1ANS9 1081 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 TGFB1P01137 390 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 NFICP08651 508 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 PSMD2Q13200 908 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 LRP8Q14114 963 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 DDX46Q7L014 1031 aaKnown RBP8.88□□□□□ -0.99
VPS50-211ENST00000474412 ZDHHC13Q8IUH4 622 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 PI4KAP1Q8N8J0 262 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 SMC1BQ8NDV3 1235 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 EZH1Q92800 747 aaPredicted RBP8.88□□□□□ -0.99
VPS50-211ENST00000474412 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
VPS50-211ENST00000474412 PIDD1Q9HB75 910 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 AK5Q9Y6K8 562 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
VPS50-211ENST00000474412 SHTN1A0MZ66 631 aa8.87□□□□□ -0.99
VPS50-211ENST00000474412 YDJCA8MPS7 323 aa8.87□□□□□ -0.99
VPS50-211ENST00000474412 VAMP4O75379 141 aa8.87□□□□□ -0.99
VPS50-211ENST00000474412 PAGE1O75459 146 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms