RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 KRT14P02533 472 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 EZRP15311 586 aaKnown RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 TCP1P17987 556 aaKnown RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 RFC4P35249 363 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 CFAP58Q5T655 872 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC24Q8N4L8 307 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 C3orf20Q8ND61 904 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 ZNF507Q8TCN5 953 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 CENPHQ9H3R5 247 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 NHEJ1Q9H9Q4 299 aaPredicted RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 TACC1O75410 805 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 SLC7A5Q01650 507 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 PPP2R5AQ15172 486 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC121Q6ZUS5 278 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC114Q96M63 670 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 NUP58Q9BVL2 599 aa16.14■□□□□ 0.17
SAMM50-203ENST00000474323 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
SAMM50-203ENST00000474323 MACROD2A1Z1Q3 448 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 SNAP23O00161 211 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 ZAP70P43403 619 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 SCARF1Q14162 830 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 HAUS3Q68CZ6 603 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 RETREG2Q8NC44 543 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 RMND1Q9NWS8 449 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 DUSP10Q9Y6W6 482 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 TAF1P21675 1872 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 ZNF233A6NK53 670 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 IFIT3O14879 490 aaKnown RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 SLC8A1P32418 973 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 HDLBPQ00341 1268 aaKnown RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 CYB5D1Q6P9G0 228 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
SAMM50-203ENST00000474323 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 MREGQ8N565 214 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 SGSM3Q96HU1 749 aa16.13■□□□□ 0.17
SAMM50-203ENST00000474323 LRP5O75197 1615 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 XDHP47989 1333 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 MROH5Q6ZUA9 1318 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 HMGB1P1B2RPK0 211 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 DNM2P50570 870 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CDK17Q00537 523 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 IFFO1Q0D2I5 559 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 RTN1Q16799 776 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 TAX1BP1Q86VP1 789 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 IFT20Q8IY31 132 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CRACR2BQ8N4Y2 399 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 COL4A1P02462 1669 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 PDS5AQ29RF7 1337 aaKnown RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 SEC24CP53992 1094 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 PPARAQ07869 468 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC181Q5TID7 509 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC43Q96MW1 224 aaKnown RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 TRIM6Q9C030 488 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-203ENST00000474323 ATP6V0A4Q9HBG4 840 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 HYOU1Q9Y4L1 999 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
SAMM50-203ENST00000474323 NEBLO76041 1014 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ADD2P35612 726 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ZBED6P86452 979 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 SPA17Q15506 151 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 C8orf74Q6P047 294 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ARFGAP2Q8N6H7 521 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ATP6V1G3Q96LB4 118 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 TTYH3Q9C0H2 523 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
SAMM50-203ENST00000474323 E7EVH7 732 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 RGL2O15211 777 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 RTN2O75298 545 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 IRX1P78414 480 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-203ENST00000474323 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
SAMM50-203ENST00000474323 STAMQ92783 540 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
SAMM50-203ENST00000474323 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 MYH7P12883 1935 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 SRGNP10124 158 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 PAX7P23759 505 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
SAMM50-203ENST00000474323 PAK2Q13177 524 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms