RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RSPO2Q6UXX9 243 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 ARHGAP27Q6ZUM4 889 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 USP53Q70EK8 1073 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 NECAB2Q7Z6G3 386 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 ANKLE2Q86XL3 938 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 DDX42Q86XP3 938 aaKnown RBP eCLIP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 ZNF655Q8N720 491 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 JDP2Q8WYK2 163 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 METTL22Q9BUU2 404 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 TRIM39Q9HCM9 518 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 GPATCH2Q9NW75 528 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 GPR55Q9Y2T6 319 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 IGF2BP3O00425 579 aaKnown RBP eCLIP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 MEFVO15553 781 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 PRAMEF1O95521 474 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 CBX7O95931 251 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 FAM87AP0C7U9 286 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 SDSP20132 328 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 SEPHS1P49903 392 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 SCRN1Q12765 414 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 CFAP100Q494V2 611 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 ACBD5Q5T8D3 534 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 RNF219Q5W0B1 726 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 E4F1Q66K89 784 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 DDX53Q86TM3 631 aaKnown RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 MTDHQ86UE4 582 aaKnown RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 MFSD4AQ8N468 514 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 AFAP1L2Q8N4X5 818 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 TMEM145Q8NBT3 493 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 DAGLBQ8NCG7 672 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 SLC7A14Q8TBB6 771 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 PANK1Q8TE04 598 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 LEO1Q8WVC0 666 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-212ENST00000473961 STAG1Q8WVM7 1258 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 USP7Q93009 1102 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 FAM84AQ96KN4 292 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 LGR4Q9BXB1 951 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 C1GALT1Q9NS00 363 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 BACE2Q9Y5Z0 518 aa5.75□□□□□ -1.49
BRCA1-212ENST00000473961 SSU72P8A0A1W2PR75 194 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 FAM155AB1AL88 458 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 CD3EP07766 207 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 JMJD7P0C870 316 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 CDKN1CP49918 316 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 KCNAB2Q13303 367 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 SNW1Q13573 536 aaKnown RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 DPY19L1Q2PZI1 675 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 RGL3Q3MIN7 710 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 SLC35F1Q5T1Q4 408 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 ZNF574Q6ZN55 896 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 ATG4DQ86TL0 474 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 PPIL6Q8IXY8 311 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 IFNL3Q8IZI9 196 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 UBR7Q8N806 425 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 OR2W6PQ8NHA6 318 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 TBC1D32Q96NH3 1257 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 TTC1Q99614 292 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 CHPF2Q9P2E5 772 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
BRCA1-212ENST00000473961 ST14Q9Y5Y6 855 aa5.74□□□□□ -1.49
BRCA1-212ENST00000473961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 C2orf71A6NGG8 1288 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 H0Y8X5 98 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 MEIS1O00470 390 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 GSTA4O15217 222 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 DYNC1LI2O43237 492 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 PARNO95453 639 aaKnown RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 BMP8BP34820 402 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 ADMP35318 185 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 SCNN1BP51168 640 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 EPHB1P54762 984 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 GUCY1A3Q02108 690 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 STRN3Q13033 797 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 PLCL1Q15111 1095 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 DUSP27Q5VZP5 1158 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 EEF1DP3Q658K8 133 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 OGFOD3Q6PK18 319 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 TMC3Q7Z5M5 1100 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 KIF18BQ86Y91 864 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 SIAH1Q8IUQ4 282 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 LRRC56Q8IYG6 542 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 WDR66Q8TBY9 1149 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 WNK4Q96J92 1243 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 GPR62Q9BZJ7 368 aa5.73□□□□□ -1.49
BRCA1-212ENST00000473961 APOBEC2Q9Y235 224 aaKnown RBP5.73□□□□□ -1.49
BRCA1-212ENST00000473961 TCRBV16S1A1N1A0A5B0 115 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 STXBP3O00186 592 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 AURKAO14965 403 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 MYO1BO43795 1136 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 ZEB2O60315 1214 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 KPNA6O60684 536 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms