RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 ASGR1P07306 291 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 PARP1P09874 1014 aaKnown RBP18.2■□□□□ 0.5
CLIC3-201ENST00000473911 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
CLIC3-201ENST00000473911 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
CLIC3-201ENST00000473911 FAAP100Q0VG06 881 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
CLIC3-201ENST00000473911 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 AP5M1Q9H0R1 490 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 VTA1Q9NP79 307 aa18.2■□□□□ 0.5
CLIC3-201ENST00000473911 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 DCDC2CA8MYV0 355 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 SGSM2O43147 1006 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
CLIC3-201ENST00000473911 TLK2Q86UE8 772 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 ADGRF4Q8IZF3 695 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
CLIC3-201ENST00000473911 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
CLIC3-201ENST00000473911 PDGFCQ9NRA1 345 aa18.19■□□□□ 0.5
CLIC3-201ENST00000473911 ERICH2A1L162 156 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 DYNC1LI2O43237 492 aaPredicted RBP18.18■□□□□ 0.5
CLIC3-201ENST00000473911 CYP21A2P08686 494 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 RAG1P15918 1043 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 SMPD1P17405 629 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 RPS6P62753 249 aaKnown RBP18.18■□□□□ 0.5
CLIC3-201ENST00000473911 BEX3Q00994 111 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 CYB5R4Q7L1T6 521 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 MORC4Q8TE76 937 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
CLIC3-201ENST00000473911 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 GNEQ9Y223 722 aaKnown RBP18.18■□□□□ 0.5
CLIC3-201ENST00000473911 ELP1O95163 1332 aa18.18■□□□□ 0.5
CLIC3-201ENST00000473911 TTC28Q96AY4 2481 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
CLIC3-201ENST00000473911 IFIT3O14879 490 aaKnown RBP18.17■□□□□ 0.5
CLIC3-201ENST00000473911 ZEB2O60315 1214 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 PTGS1P23219 599 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 PDE4DQ08499 809 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
CLIC3-201ENST00000473911 FSCN1Q16658 493 aaKnown RBP18.17■□□□□ 0.5
CLIC3-201ENST00000473911 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 ANKRD33Q7Z3H0 272 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 ABCB11O95342 1321 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 MROH7Q68CQ1 1323 aa18.17■□□□□ 0.5
CLIC3-201ENST00000473911 CHD7Q9P2D1 2997 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 B4DLN1 442 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
CLIC3-201ENST00000473911 NKX3-2P78367 333 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
CLIC3-201ENST00000473911 SEC23AQ15436 765 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 QRICH1Q2TAL8 776 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 C16orf59Q7L2K0 433 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 FBXO11Q86XK2 927 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 DNERQ8NFT8 737 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 TOX2Q96NM4 488 aa18.16■□□□□ 0.5
CLIC3-201ENST00000473911 E7EWF7 191 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 ARVCFO00192 962 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 CTAGE5O15320 804 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 FPGSQ05932 587 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 GRIN2CQ14957 1233 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 CXCL17Q6UXB2 119 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 RGS22Q8NE09 1264 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 JMJD4Q9H9V9 463 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 TBX21Q9UL17 535 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 MRPL11Q9Y3B7 192 aaKnown RBP18.15■□□□□ 0.5
CLIC3-201ENST00000473911 Q9Y3F1 56 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 REV3LO60673 3130 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 MUC3AQ02505 3323 aa18.15■□□□□ 0.5
CLIC3-201ENST00000473911 KLRF2D3W0D1 207 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 CABYRO75952 493 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 CDK7P50613 346 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 WTAPQ15007 396 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 MCF2L2Q86YR7 1114 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLIC3-201ENST00000473911 RBM8AQ9Y5S9 174 aaKnown RBP18.14■□□□□ 0.49
CLIC3-201ENST00000473911 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
CLIC3-201ENST00000473911 GRXCR1A8MXD5 290 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
CLIC3-201ENST00000473911 TIMP1P01033 207 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 FOSL2P15408 326 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 DUSP28Q4G0W2 176 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 TMEM63BQ5T3F8 832 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
CLIC3-201ENST00000473911 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 MAF1Q9H063 256 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 MYO9BQ13459 2157 aa18.13■□□□□ 0.49
CLIC3-201ENST00000473911 EDNRBP24530 442 aa18.12■□□□□ 0.49
CLIC3-201ENST00000473911 DNAJB2P25686 324 aa18.12■□□□□ 0.49
CLIC3-201ENST00000473911 PBX2P40425 430 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms