RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 THRAP3Q9Y2W1 955 aaKnown RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 PNPLA7Q6ZV29 1317 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 COL6A3P12111 3177 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 CCDC144AA2RUR9 1427 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 RASSF10A6NK89 507 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 H3BS24 57 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 STK10O94804 968 aaKnown RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 EOMESO95936 686 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 GSTP1P09211 210 aaKnown RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 LMNB1P20700 586 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 TNNI2P48788 182 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 HK2P52789 917 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 ERVK-24P63145 666 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 EFEMP1Q12805 493 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 ZNF394Q53GI3 561 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 SOGA3Q5TF21 947 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 DIEXFQ68CQ4 756 aaKnown RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 DPH6Q7L8W6 267 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 UBE3DQ7Z6J8 389 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 TCP11L2Q8N4U5 519 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 EPS8L3Q8TE67 593 aaKnown RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 KCNB2Q92953 911 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 TEPSINQ96N21 525 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.32□□□□□ -1.88
CALD1-216ENST00000473714 HIRIP3Q9BW71 556 aaPredicted RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 SLC6A17Q9H1V8 727 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 C12orf49Q9H741 205 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 FAM8A1Q9UBU6 413 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 TMEM59LQ9UK28 342 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 TTF2Q9UNY4 1162 aaKnown RBP3.32□□□□□ -1.88
CALD1-216ENST00000473714 PCDHGB7Q9Y5F8 929 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 SBNO1A3KN83 1393 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 ARHGEF10O15013 1369 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 CCNB3Q8WWL7 1395 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 ATP7BP35670 1465 aa3.32□□□□□ -1.88
CALD1-216ENST00000473714 AKAP12Q02952 1782 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 CRYBG1Q9Y4K1 1723 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 CCDC18Q5T9S5 1454 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 WDR33Q9C0J8 1336 aaKnown RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 DNAJC25-GNG10A0A024R161 153 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 TEX51A0A1B0GUA7 166 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 MYOCOSA0A1B0GUC4 107 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 CLSTN1O94985 981 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 HPXP02790 462 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 SSBP05455 408 aaKnown RBP eCLIP3.31□□□□□ -1.88
CALD1-216ENST00000473714 USP17L7P0C7H9 530 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 PTPN12Q05209 780 aaKnown RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 DEFB115Q30KQ5 88 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 RPS26P11Q5JNZ5 115 aaPredicted RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 RALGPS1Q5JS13 557 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 NXPE4Q6UWF7 544 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 METTL16Q86W50 562 aaKnown RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 RELL1Q8IUW5 271 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 MFSD4AQ8N468 514 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 SLC43A3Q8NBI5 491 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 FEZF2Q8TBJ5 459 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 STK35Q8TDR2 534 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 CPLX3Q8WVH0 158 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 UBE2FQ969M7 185 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 SRCIN1Q9C0H9 1055 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 RNF32Q9H0A6 362 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 EHD4Q9H223 541 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 PICK1Q9NRD5 415 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 PALD1Q9ULE6 856 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 AKAP2Q9Y2D5 859 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 TMA7Q9Y2S6 64 aaKnown RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 R3HCC1Q9Y3T6 440 aaKnown RBP3.31□□□□□ -1.88
CALD1-216ENST00000473714 KAT6BQ8WYB5 2073 aa3.31□□□□□ -1.88
CALD1-216ENST00000473714 SBF1O95248 1867 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 KIF1AQ12756 1690 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 PASKQ96RG2 1323 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 CA12O43570 354 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 TSPY4P0CV99 314 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 TSPY10P0CW01 314 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 GSTT1P30711 240 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 AFF3P51826 1226 aaKnown RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 RAD51AP2Q09MP3 1159 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 SSPNQ14714 243 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 CCDC85BQ15834 202 aaPredicted RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 ZC3H12AQ5D1E8 599 aaKnown RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 SFRP5Q5T4F7 317 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 KIAA0319Q5VV43 1072 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 PI16Q6UXB8 463 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 CDC37L1Q7L3B6 337 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 THAP5Q7Z6K1 395 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 NOP9Q86U38 636 aaKnown RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 SP8Q8IXZ3 490 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 SPATA32Q96LK8 384 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 TINF2Q9BSI4 451 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 SGPP1Q9BX95 441 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 BCO2Q9BYV7 579 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 ZSWIM4Q9H7M6 989 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 ZSWIM5Q9P217 1185 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 SRRDQ9UH36 339 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 DDX41Q9UJV9 622 aaKnown RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 TPX2Q9ULW0 747 aaKnown RBP3.3□□□□□ -1.88
CALD1-216ENST00000473714 TRAK1Q9UPV9 953 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 LRRC37A3O60309 1634 aa3.3□□□□□ -1.88
CALD1-216ENST00000473714 CDC42BPGQ6DT37 1551 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms