RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 THEGQ9P2T0 379 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 SYNPO2Q9UMS6 1093 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ASB14A6NK59 587 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 GSG1L2A8MUP6 293 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 ADCY6O43306 1168 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CABYRO75952 493 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 ZFYP08048 801 aaPredicted RBP8.22□□□□□ -1.09
CKS1B-205ENST00000473344 SLC3A2P08195 630 aaKnown RBP8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CYP2C18P33260 490 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 BEX3Q00994 111 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 PDE4BQ07343 736 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
CKS1B-205ENST00000473344 AKNAD1Q5T1N1 836 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 SLFN13Q68D06 897 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 C16orf59Q7L2K0 433 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 TLK2Q86UE8 772 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 KBTBD3Q8NAB2 608 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 GMCL1P1Q8NEA9 526 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CHURC1Q8WUH1 139 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 APPBP2Q92624 585 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 MKL1Q969V6 931 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 ASB2Q96Q27 587 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 NACAP1Q9BZK3 213 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 UPF3AQ9H1J1 476 aaKnown RBP8.22□□□□□ -1.09
CKS1B-205ENST00000473344 HIPK3Q9H422 1215 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 IL23AQ9NPF7 189 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 MTMR4Q9NYA4 1195 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 MYH8P13535 1937 aa8.22□□□□□ -1.09
CKS1B-205ENST00000473344 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 TMEM232C9JQI7 657 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 RNF113AO15541 343 aaKnown RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 DYNC1LI2O43237 492 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 GPAA1O43292 621 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 SMARCA5O60264 1052 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 COL9A1P20849 921 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 SLC1A4P43007 532 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 CCL23P55773 120 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 MRPS5P82675 430 aaKnown RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 CNTN2Q02246 1040 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 ITGA7Q13683 1181 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 FSCN1Q16658 493 aaKnown RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 RASIP1Q5U651 963 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 FAM160B2Q86V87 743 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 RPUSD2Q8IZ73 545 aaKnown RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 HERVK_113Q902F9 699 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 OSBP2Q969R2 916 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 SEZ6LQ9BYH1 1024 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 RNF146Q9NTX7 359 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 REV3LO60673 3130 aa8.21□□□□□ -1.1
CKS1B-205ENST00000473344 COL11A1P12107 1806 aaPredicted RBP8.21□□□□□ -1.1
CKS1B-205ENST00000473344 CHD7Q9P2D1 2997 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 PARP14Q460N5 1801 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 IGKV6D-41A0A0C4DH26 115 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-205ENST00000473344 ZBBXA8MT70 800 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 CD4P01730 458 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 ALAS1P13196 640 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 TFAP4Q01664 338 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 MFSD10Q14728 455 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 TKFCQ3LXA3 575 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 EEPD1Q7L9B9 569 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 IFNL3Q8IZI9 196 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 FAM133AQ8N9E0 248 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 CHMP4CQ96CF2 233 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 FGD4Q96M96 766 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-205ENST00000473344 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 NAPBQ9H115 298 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 NKX2-4Q9H2Z4 354 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 A1CFQ9NQ94 594 aaKnown RBP8.2□□□□□ -1.1
CKS1B-205ENST00000473344 CXXC1Q9P0U4 656 aaPredicted RBP8.2□□□□□ -1.1
CKS1B-205ENST00000473344 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
CKS1B-205ENST00000473344 PLXNA1Q9UIW2 1896 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 BAZ2AQ9UIF9 1905 aaKnown RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 CTAGE5O15320 804 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 B4GALT4O60513 344 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 SUPT20HL2P0C7V6 817 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 MCCP23508 829 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 ANP32AP39687 249 aaKnown RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 NKX3-2P78367 333 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
CKS1B-205ENST00000473344 IQSEC1Q6DN90 963 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
CKS1B-205ENST00000473344 SLC43A3Q8NBI5 491 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms