RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 BMP8BP34820 402 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 FXR1P51114 621 aaKnown RBP eCLIP26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 TROAPQ12815 778 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 IQSEC1Q6DN90 963 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 TAPT1Q6NXT6 567 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 NOL8Q76FK4 1167 aaKnown RBP26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 PCSK9Q8NBP7 692 aaKnown RBP26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 DNERQ8NFT8 737 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 NUP133Q8WUM0 1156 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 MTMR8Q96EF0 704 aa26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 MPHOSPH6Q99547 160 aaKnown RBP26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 MRPL11Q9Y3B7 192 aaKnown RBP26.24■■□□□ 1.79
PTP4A1-203ENST00000473334 PRC1O43663 620 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 MCM5P33992 734 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 NKX3-2P78367 333 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 IRX5P78411 483 aaPredicted RBP26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 MCF2L2Q86YR7 1114 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 AMNQ9BXJ7 453 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 LY9Q9HBG7 655 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 PDGFCQ9NRA1 345 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 PRKAG2Q9UGJ0 569 aa26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 GNEQ9Y223 722 aaKnown RBP26.23■■□□□ 1.79
PTP4A1-203ENST00000473334 GNASQ5JWF2 1037 aa26.22■■□□□ 1.79
PTP4A1-203ENST00000473334 TLK2Q86UE8 772 aa26.22■■□□□ 1.79
PTP4A1-203ENST00000473334 TMEM87BQ96K49 555 aa26.22■■□□□ 1.79
PTP4A1-203ENST00000473334 STARD7Q9NQZ5 370 aa26.22■■□□□ 1.79
PTP4A1-203ENST00000473334 LTBP2Q14767 1821 aa26.22■■□□□ 1.79
PTP4A1-203ENST00000473334 B4DLN1 442 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 ZBTB5O15062 677 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 SMPD1P17405 629 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 EDNRBP24530 442 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 MRPL12P52815 198 aaKnown RBP26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 PDE4DQ08499 809 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 RNF20Q5VTR2 975 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 TBC1D5Q92609 795 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 RIOX1Q9H6W3 641 aa26.21■■□□□ 1.79
PTP4A1-203ENST00000473334 CTAGE5O15320 804 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 ASGR1P07306 291 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 SLC35G1Q2M3R5 365 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 ZNF654Q8IZM8 581 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 GLT1D1Q96MS3 346 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 MAP3K14Q99558 947 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 AP5M1Q9H0R1 490 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 GPHNQ9NQX3 736 aaPredicted RBP26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 PCDH10Q9P2E7 1040 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 Q9Y3F1 56 aa26.2■■□□□ 1.78
PTP4A1-203ENST00000473334 SH2B2O14492 632 aaPredicted RBP26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 PPP1R11O60927 126 aaPredicted RBP26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 DDAH1O94760 285 aa26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 MDM2Q00987 491 aaPredicted RBP26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 TLE2Q04725 743 aa26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 HOMER1Q86YM7 354 aa26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 TMTC2Q8N394 836 aa26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 SYTL5Q8TDW5 730 aaPredicted RBP26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 PRDM5Q9NQX1 630 aaPredicted RBP26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 PDLIM7Q9NR12 457 aa26.19■■□□□ 1.78
PTP4A1-203ENST00000473334 ELP1O95163 1332 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 RBM47A0AV96 593 aaKnown RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 DYNC1LI2O43237 492 aaPredicted RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 CYTH3O43739 400 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 BEX3Q00994 111 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 TRAF1Q13077 416 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 COL9A3Q14050 684 aaPredicted RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 DUSP28Q4G0W2 176 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 NFXL1Q6ZNB6 911 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 CTCFLQ8NI51 663 aaPredicted RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 PIGSQ96S52 555 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 LBHD1Q9BQE6 289 aaPredicted RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 WDR11Q9BZH6 1224 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 UBE2OQ9C0C9 1292 aaKnown RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 BAZ2BQ9UIF8 2168 aaKnown RBP26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 PCDHA1Q9Y5I3 950 aa26.18■■□□□ 1.78
PTP4A1-203ENST00000473334 CCDC69A6NI79 296 aa26.17■■□□□ 1.78
PTP4A1-203ENST00000473334 FSCN1Q16658 493 aaKnown RBP26.17■■□□□ 1.78
PTP4A1-203ENST00000473334 TMEM63BQ5T3F8 832 aa26.17■■□□□ 1.78
PTP4A1-203ENST00000473334 COL20A1Q9P218 1284 aa26.17■■□□□ 1.78
PTP4A1-203ENST00000473334 OPLAHO14841 1288 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 PQBP1O60828 265 aaKnown RBP26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 CFBP00751 764 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 PTGS1P23219 599 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 KIF5BP33176 963 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 LIFRP42702 1097 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 GHRHRQ02643 423 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 NSUN6Q8TEA1 469 aaKnown RBP26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 TAAR1Q96RJ0 339 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 MYL10Q9BUA6 226 aa26.16■■□□□ 1.78
PTP4A1-203ENST00000473334 PNMA6FA0A0J9YX94 578 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 A0A0U1RQG5 324 aaPredicted RBP26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 ZEB2O60315 1214 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 CLTBP09497 229 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 HSD17B4P51659 736 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 ANKRD33Q7Z3H0 272 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 VTI1AQ96AJ9 217 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 TOX2Q96NM4 488 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 RMDN3Q96TC7 470 aa26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 MAP3K20Q9NYL2 800 aaKnown RBP26.15■■□□□ 1.78
PTP4A1-203ENST00000473334 MROH7Q68CQ1 1323 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 TSGA10IPQ3SY00 556 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 SH3RF1Q7Z6J0 888 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 TDHQ8IZJ6 230 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms