RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SYNGAP1Q96PV0 1343 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 BAZ2BQ9UIF8 2168 aaKnown RBP23.98■■□□□ 1.43
TOP3A-204ENST00000472959 LOC102724159A0A0B4J2E5 919 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 SOWAHBA6NEL2 793 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 OPLAHO14841 1288 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 CYP2C19P33261 490 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 CACNB2Q08289 660 aaPredicted RBP23.98■■□□□ 1.43
TOP3A-204ENST00000472959 TRIM32Q13049 653 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 PWP2Q15269 919 aaKnown RBP23.98■■□□□ 1.43
TOP3A-204ENST00000472959 SLC30A10Q6XR72 485 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 HEATR3Q7Z4Q2 680 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 HMX1Q9NP08 348 aaPredicted RBP23.98■■□□□ 1.43
TOP3A-204ENST00000472959 LIMCH1Q9UPQ0 1083 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 RPTORQ8N122 1335 aa23.98■■□□□ 1.43
TOP3A-204ENST00000472959 ASB14A6NK59 587 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 ST18O60284 1047 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 CDKL5O76039 1030 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 CFBP00751 764 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 CCL5P13501 91 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 HSD17B4P51659 736 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 SCRN1Q12765 414 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 ME3Q16798 604 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 NOL8Q76FK4 1167 aaKnown RBP23.97■■□□□ 1.43
TOP3A-204ENST00000472959 TRIM22Q8IYM9 498 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 DNERQ8NFT8 737 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 SYTL5Q8TDW5 730 aaPredicted RBP23.97■■□□□ 1.43
TOP3A-204ENST00000472959 TBC1D5Q92609 795 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 TMEM106CQ9BVX2 250 aa23.97■■□□□ 1.43
TOP3A-204ENST00000472959 CCDC85CA6NKD9 419 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 GCOM1H8Y6P7 765 aaPredicted RBP23.96■■□□□ 1.43
TOP3A-204ENST00000472959 CAPN15O75808 1086 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 POLR2MP0CAP2 368 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 MTFR1Q15390 333 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 PFKFB3Q16875 520 aaPredicted RBP23.96■■□□□ 1.43
TOP3A-204ENST00000472959 PPP1R18Q6NYC8 613 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 TEX2Q8IWB9 1127 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 PHKBQ93100 1093 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 MPHOSPH6Q99547 160 aaKnown RBP23.96■■□□□ 1.43
TOP3A-204ENST00000472959 RNF208Q9H0X6 261 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 UNC93B1Q9H1C4 597 aa23.96■■□□□ 1.43
TOP3A-204ENST00000472959 SMCHD1A6NHR9 2005 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 B4DLN1 442 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 MYCP01106 439 aaPredicted RBP23.95■■□□□ 1.42
TOP3A-204ENST00000472959 SCG2P13521 617 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 MRPL12P52815 198 aaKnown RBP23.95■■□□□ 1.42
TOP3A-204ENST00000472959 SSRP1Q08945 709 aaKnown RBP23.95■■□□□ 1.42
TOP3A-204ENST00000472959 WWC2Q6AWC2 1192 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 ZSCAN31Q96LW9 406 aaPredicted RBP23.95■■□□□ 1.42
TOP3A-204ENST00000472959 PURBQ96QR8 312 aaKnown RBP23.95■■□□□ 1.42
TOP3A-204ENST00000472959 SLC26A6Q9BXS9 759 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 BARHL2Q9NY43 387 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 CNPY2Q9Y2B0 182 aa23.95■■□□□ 1.42
TOP3A-204ENST00000472959 SNAI1O95863 264 aaPredicted RBP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 CYBAP13498 195 aa23.94■■□□□ 1.42
TOP3A-204ENST00000472959 ARMCX2Q7L311 632 aa23.94■■□□□ 1.42
TOP3A-204ENST00000472959 NSUN6Q8TEA1 469 aaKnown RBP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 GPKOWQ92917 476 aaPredicted RBP eCLIP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 CUL5Q93034 780 aa23.94■■□□□ 1.42
TOP3A-204ENST00000472959 GTF3C6Q969F1 213 aa23.94■■□□□ 1.42
TOP3A-204ENST00000472959 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 PSTPIP2Q9H939 334 aa23.94■■□□□ 1.42
TOP3A-204ENST00000472959 PAK6Q9NQU5 681 aaPredicted RBP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 ZNFX1Q9P2E3 1918 aaKnown RBP23.94■■□□□ 1.42
TOP3A-204ENST00000472959 ASTN1O14525 1302 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 STXBP3O00186 592 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 PIK3CDO00329 1044 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 GJB1P08034 283 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 ALDH5A1P51649 535 aaPredicted RBP23.93■■□□□ 1.42
TOP3A-204ENST00000472959 NAPAP54920 295 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 PKN1Q16512 942 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 MORC4Q8TE76 937 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 ABHD16BQ9H3Z7 469 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.93■■□□□ 1.42
TOP3A-204ENST00000472959 COL20A1Q9P218 1284 aa23.93■■□□□ 1.42
TOP3A-204ENST00000472959 CAPN2P17655 700 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 HOXA13P31271 388 aaPredicted RBP23.92■■□□□ 1.42
TOP3A-204ENST00000472959 NECAB1Q8N987 351 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 TRPV1Q8NER1 839 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 CCDC12Q8WUD4 166 aaPredicted RBP23.92■■□□□ 1.42
TOP3A-204ENST00000472959 TAAR1Q96RJ0 339 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 RMDN3Q96TC7 470 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 GLT8D2Q9H1C3 349 aa23.92■■□□□ 1.42
TOP3A-204ENST00000472959 SH2B1Q9NRF2 756 aaPredicted RBP23.92■■□□□ 1.42
TOP3A-204ENST00000472959 DEXIO95424 95 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 LARGE1O95461 756 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 CCND3P30281 292 aaPredicted RBP23.91■■□□□ 1.42
TOP3A-204ENST00000472959 MCM2P49736 904 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 PRAMEF19Q5SWL8 479 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 SMARCC2Q8TAQ2 1214 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 IWS1Q96ST2 819 aa23.91■■□□□ 1.42
TOP3A-204ENST00000472959 MYH6P13533 1939 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 STK36Q9NRP7 1315 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 MEIS2O14770 477 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 MSCO60682 206 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 PPFIA3O75145 1194 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 EDNRBP24530 442 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 ACVR2BQ13705 512 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 ARHGEF16Q5VV41 709 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 TYW1BQ6NUM6 668 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 RIC8AQ9NPQ8 531 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms