RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PLCL1Q15111 1095 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 TESK1Q15569 626 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 TRIM61Q5EBN2 209 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 SLC23A3Q6PIS1 610 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 RSPO2Q6UXX9 243 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 DHX37Q8IY37 1157 aaKnown RBP6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 NIM1KQ8IY84 436 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 AGBL5Q8NDL9 886 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 SLC7A14Q8TBB6 771 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 ZFYVE21Q9BQ24 234 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 GPR27Q9NS67 375 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 NPFFR2Q9Y5X5 522 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 ARNTLO00327 626 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 MYO1BO43795 1136 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 NPHS1O60500 1241 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 ANKS4BQ8N8V4 417 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 LINC01599Q8WXQ3 324 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 HHIPL1Q96JK4 782 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 MAGEB10Q96LZ2 347 aaPredicted RBP6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 PRKAB1Q9Y478 270 aa6.95□□□□□ -1.3
PRPF40A-208ENST00000472760 ASXL2Q76L83 1435 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 FADS2P1A8MWK0 482 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 IRS4O14654 1257 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 KCNQ2O43526 872 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 LCP1P13796 627 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 NAT1P18440 290 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 KIR2DL1P43626 348 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 KIR2DL2P43627 348 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 GPR85P60893 370 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 INF2Q27J81 1249 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 CEP128Q6ZU80 1094 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 FILIP1Q7Z7B0 1213 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 MTDHQ86UE4 582 aaKnown RBP6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 SPPL2CQ8IUH8 684 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 RCBTB1Q8NDN9 531 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 GSTCDQ8NEC7 633 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 MFSD3Q96ES6 412 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 CHAMP1Q96JM3 812 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 TMX1Q9H3N1 280 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 EBF1Q9UH73 591 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 PCDHA2Q9Y5H9 948 aa6.94□□□□□ -1.3
PRPF40A-208ENST00000472760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQ45 241 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQC6 194 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQY0 241 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 C7orf72A4D263 438 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 RTP1P59025 263 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 GUCY1A3Q02108 690 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 CHRNEQ04844 493 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 LRP8Q14114 963 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 MBLAC2Q68D91 279 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 NFXL1Q6ZNB6 911 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 OXR1Q8N573 874 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 PDZD8Q8NEN9 1154 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 TRIM39Q9HCM9 518 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 PCDHA9Q9Y5H5 950 aa6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 TIMM13Q9Y5L4 95 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-208ENST00000472760 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 WTIPA6NIX2 430 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 OPA1O60313 960 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 MSCO60682 206 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 DNAJC6O75061 913 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 CRTAMO95727 393 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 MYCLP1P12525 358 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 SDSP20132 328 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 MASP1P48740 699 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 GTF2A2P52657 109 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 RPL11P62913 178 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 LBX2Q6XYB7 198 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 JMJD8Q96S16 334 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 ALG1Q9BT22 464 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 INTS7Q9NVH2 962 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 BTG4Q9NY30 223 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
PRPF40A-208ENST00000472760 FITM1A5D6W6 292 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 HYAL3O43820 417 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 ADAMTS4O75173 837 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 BCL6P41182 706 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 CEBPAP49715 358 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 LSAMPQ13449 338 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms