RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 CCSAPQ6IQ19 270 aaPredicted RBP23.11■■□□□ 1.29
UBQLN4-203ENST00000472638 MORC4Q8TE76 937 aa23.11■■□□□ 1.29
UBQLN4-203ENST00000472638 UPF3AQ9H1J1 476 aaKnown RBP23.11■■□□□ 1.29
UBQLN4-203ENST00000472638 PRDM5Q9NQX1 630 aaPredicted RBP23.11■■□□□ 1.29
UBQLN4-203ENST00000472638 LCTP09848 1927 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 SMPD1P17405 629 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 SNX17Q15036 470 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 SLC35G1Q2M3R5 365 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 CATIPQ7Z7H3 387 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 HOMER1Q86YM7 354 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 NUP133Q8WUM0 1156 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 VTA1Q9NP79 307 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 STARD7Q9NQZ5 370 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 PRKAG2Q9UGJ0 569 aa23.1■■□□□ 1.29
UBQLN4-203ENST00000472638 DYNC1LI2O43237 492 aaPredicted RBP23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 ASGR1P07306 291 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 TLE2Q04725 743 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 PDE4DQ08499 809 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 TROAPQ12815 778 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 IQSEC1Q6DN90 963 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 TLK2Q86UE8 772 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 RGS22Q8NE09 1264 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 VTI1AQ96AJ9 217 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 MYL10Q9BUA6 226 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 UBE2OQ9C0C9 1292 aaKnown RBP23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 LY9Q9HBG7 655 aa23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 GNEQ9Y223 722 aaKnown RBP23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
UBQLN4-203ENST00000472638 LRRC37A2A6NM11 1700 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 DNAH12Q6ZR08 3092 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 CTAGE5O15320 804 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 PQBP1O60828 265 aaKnown RBP23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 PPP1R11O60927 126 aaPredicted RBP23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 CST5P28325 142 aaPredicted RBP23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 MCM5P33992 734 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 BMP8BP34820 402 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 PCSK9Q8NBP7 692 aaKnown RBP23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 PIGSQ96S52 555 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 BACH2Q9BYV9 841 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 AP5M1Q9H0R1 490 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 TRIOBPQ9H2D6 2365 aa23.08■■□□□ 1.29
UBQLN4-203ENST00000472638 ZBTB5O15062 677 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 C1orf53Q5VUE5 145 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 NFXL1Q6ZNB6 911 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 SH3RF1Q7Z6J0 888 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 MCF2L2Q86YR7 1114 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 ZNF654Q8IZM8 581 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 SYTL5Q8TDW5 730 aaPredicted RBP23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 PIBF1Q8WXW3 757 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 MTMR8Q96EF0 704 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 TAAR1Q96RJ0 339 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 LBHD1Q9BQE6 289 aaPredicted RBP23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 LRRC2Q9BYS8 371 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 COL20A1Q9P218 1284 aa23.07■■□□□ 1.28
UBQLN4-203ENST00000472638 LOC102724159A0A0B4J2E5 919 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 SH2B2O14492 632 aaPredicted RBP23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 PWP2Q15269 919 aaKnown RBP23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 GLT1D1Q96MS3 346 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 MPHOSPH6Q99547 160 aaKnown RBP23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 WDR11Q9BZH6 1224 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 RIOX1Q9H6W3 641 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 PDLIM7Q9NR12 457 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 PCDHA1Q9Y5I3 950 aa23.06■■□□□ 1.28
UBQLN4-203ENST00000472638 CYTH3O43739 400 aa23.05■■□□□ 1.28
UBQLN4-203ENST00000472638 CFBP00751 764 aa23.05■■□□□ 1.28
UBQLN4-203ENST00000472638 EDNRBP24530 442 aa23.05■■□□□ 1.28
UBQLN4-203ENST00000472638 FSCN1Q16658 493 aaKnown RBP23.05■■□□□ 1.28
UBQLN4-203ENST00000472638 RAB11FIP4Q86YS3 637 aa23.05■■□□□ 1.28
UBQLN4-203ENST00000472638 RANBP2P49792 3224 aaKnown RBP23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 A0A1W2PPC1 479 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 TRIM43BA6NCK2 446 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 CCDC69A6NI79 296 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 OPLAHO14841 1288 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 RNF20Q5VTR2 975 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 CXCL17Q6UXB2 119 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 TRIM43Q96BQ3 446 aaPredicted RBP23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 TMEM87BQ96K49 555 aa23.04■■□□□ 1.28
UBQLN4-203ENST00000472638 B4DLN1 442 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 DDAH1O94760 285 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 REC8O95072 547 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 CLTBP09497 229 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 RXRAP19793 462 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 MRPL12P52815 198 aaKnown RBP23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 NKX3-2P78367 333 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 DUSP28Q4G0W2 176 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 NSUN6Q8TEA1 469 aaKnown RBP23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 RMDN3Q96TC7 470 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 ELP1O95163 1332 aa23.03■■□□□ 1.28
UBQLN4-203ENST00000472638 RBM47A0AV96 593 aaKnown RBP23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 SOX1O00570 391 aaPredicted RBP23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 EIF2AK2P19525 551 aaKnown RBP23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 ARHGEF16Q5VV41 709 aa23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 RASEFQ8IZ41 740 aa23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 TDHQ8IZJ6 230 aa23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 TMTC2Q8N394 836 aa23.02■■□□□ 1.28
UBQLN4-203ENST00000472638 BADQ92934 168 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms