RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	PRR20D	P86480	221 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	PRR20B	P86481	221 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	PRR20A	P86496	221 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	KRTAP1-1	Q07627	177 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	DHX9	Q08211	1270 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	TBX2	Q13207	712 aa	Predicted RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	ARHGEF6	Q15052	776 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	SF3B3	Q15393	1217 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	CCNG2	Q16589	344 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	AKAP4	Q5JQC9	854 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	HECTD3	Q5T447	861 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	INTS11	Q5TA45	600 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	SPATA1	Q5VX52	437 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	KAZN	Q674X7	775 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	OLFML1	Q6UWY5	402 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	RAPH1	Q70E73	1250 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	EPM2AIP1	Q7L775	607 aa	Predicted RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	VASH1	Q7L8A9	365 aa	Predicted RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	SLC7A5P1	Q8MH63	180 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	SPATA5	Q8NB90	893 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	ANAPC16	Q96DE5	110 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	CLMN	Q96JQ2	1002 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	IPO9	Q96P70	1041 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	RBM14	Q96PK6	669 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	GBP4	Q96PP9	640 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	TTPAL	Q9BTX7	342 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	TCF7L2	Q9NQB0	619 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	UBAP1	Q9NZ09	502 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	SPATA7	Q9P0W8	599 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	PLAA	Q9Y263	795 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	NOSIP	Q9Y314	301 aa	Known RBP	3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	RNF123	Q5XPI4	1314 aa		3.67	□□□□□ -1.82
TTC3-214	ENST00000472398	PNMA6F	A0A0J9YX94	578 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	C17orf113	A0A1B0GUU1	675 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	KRBA1	A5PL33	1030 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	FAM83G	A6ND36	823 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	TBKBP1	A7MCY6	615 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398		M0R2N6	131 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ERVH48-1	M5A8F1	160 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	HOXC11	O43248	304 aa	Predicted RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	KPNA6	O60684	536 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	RFPL1	O75677	317 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	EOMES	O95936	686 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	KRT1	P04264	644 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	SLC3A2	P08195	630 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	DES	P17661	470 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	INPP5B	P32019	993 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	CHKA	P35790	457 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	NRL	P54845	237 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	CASP7	P55210	303 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	GBE1	Q04446	702 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	AP1B1	Q10567	949 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	USP4	Q13107	963 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	FILIP1L	Q4L180	1135 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	METTL24	Q5JXM2	366 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ZNF697	Q5TEC3	545 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	USPL1	Q5W0Q7	1092 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	LIN54	Q6MZP7	749 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	LRP10	Q7Z4F1	713 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	IQCA1	Q86XH1	822 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	COLGALT2	Q8IYK4	626 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	PPM1N	Q8N819	430 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	EPS8L3	Q8TE67	593 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	MFSD3	Q96ES6	412 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	BICD1	Q96G01	975 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	TBATA	Q96M53	351 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	JAKMIP1	Q96N16	626 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	CCDC68	Q9H2F9	335 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	PDLIM7	Q9NR12	457 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ZNHIT6	Q9NWK9	470 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	QPCTL	Q9NXS2	382 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	GGA3	Q9NZ52	723 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ARHGAP28	Q9P2N2	729 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	EPS15L1	Q9UBC2	864 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ZC3H7B	Q9UGR2	993 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	TRIM17	Q9Y577	477 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	PCDHB11	Q9Y5F2	797 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	LRRFIP2	Q9Y608	721 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	GSG1L2	A8MUP6	293 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	LACTBL1	A8MY62	500 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	MASP2	O00187	686 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	AREL1	O15033	823 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	LILRA1	O75019	489 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	STAM2	O75886	525 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	TGDS	O95455	350 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	CP	P00450	1065 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	HSPA1A	P0DMV8	641 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	HSPA1B	P0DMV9	641 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	HARS	P12081	509 aa	Known RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ATP1A3	P13637	1013 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	AKR1B1	P15121	316 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ATP6V1B1	P15313	513 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	KCNJ4	P48050	445 aa		3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	ALDH5A1	P51649	535 aa	Predicted RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	GTF2A1	P52655	376 aa	Predicted RBP	3.66	□□□□□ -1.82
TTC3-214	ENST00000472398	C21orf58	P58505	322 aa		3.66	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms