RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 PDE4DIPQ5VU43 2346 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 SOWAHBA6NEL2 793 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 GOLGA8BA8MQT2 603 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 SNAI1O95863 264 aaPredicted RBP19.39■□□□□ 0.69
TSPO-205ENST00000472378 PRAMEF19Q5SWL8 479 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 TRPV1Q8NER1 839 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 NSUN6Q8TEA1 469 aaKnown RBP19.39■□□□□ 0.69
TSPO-205ENST00000472378 AGXT2Q9BYV1 514 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 SPC25Q9HBM1 224 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 VTA1Q9NP79 307 aa19.39■□□□□ 0.69
TSPO-205ENST00000472378 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
TSPO-205ENST00000472378 CFBP00751 764 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 ZNF865P0CJ78 1059 aaPredicted RBP19.38■□□□□ 0.69
TSPO-205ENST00000472378 RXRAP19793 462 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 METAP2P50579 478 aaKnown RBP eCLIP19.38■□□□□ 0.69
TSPO-205ENST00000472378 ALDH5A1P51649 535 aaPredicted RBP19.38■□□□□ 0.69
TSPO-205ENST00000472378 TEX2Q8IWB9 1127 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
TSPO-205ENST00000472378 MORC4Q8TE76 937 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 FGD4Q96M96 766 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 IWS1Q96ST2 819 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 BRPF3Q9ULD4 1205 aa19.38■□□□□ 0.69
TSPO-205ENST00000472378 MCM3APO60318 1980 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 KBTBD13C9JR72 458 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
TSPO-205ENST00000472378 hCG_1984214I3L0E3 225 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 DNM1LO00429 736 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 POLR2MP0CAP2 368 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 GHRHRQ02643 423 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 PDE4DQ08499 809 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 COL9A3Q14050 684 aaPredicted RBP19.37■□□□□ 0.69
TSPO-205ENST00000472378 SLC30A10Q6XR72 485 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 RNF180Q86T96 592 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 ZNF713Q8N859 430 aaPredicted RBP19.37■□□□□ 0.69
TSPO-205ENST00000472378 CUL5Q93034 780 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 XPNPEP3Q9NQH7 507 aa19.37■□□□□ 0.69
TSPO-205ENST00000472378 DUSP11O75319 330 aaKnown RBP19.36■□□□□ 0.69
TSPO-205ENST00000472378 PLEKHA8P1O95397 391 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 CPA1P15085 419 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 TAL1P17542 331 aaPredicted RBP19.36■□□□□ 0.69
TSPO-205ENST00000472378 HSD17B4P51659 736 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 EVCP57679 992 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 APOBRQ0VD83 1088 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 IQSEC1Q6DN90 963 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 UBE2Q1Q7Z7E8 422 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 RMDN3Q96TC7 470 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 PDRG1Q9NUG6 133 aa19.36■□□□□ 0.69
TSPO-205ENST00000472378 PPP1R11O60927 126 aaPredicted RBP19.35■□□□□ 0.69
TSPO-205ENST00000472378 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
TSPO-205ENST00000472378 CCDC144BQ3MJ40 725 aa19.35■□□□□ 0.69
TSPO-205ENST00000472378 ARHGEF16Q5VV41 709 aa19.35■□□□□ 0.69
TSPO-205ENST00000472378 NOL8Q76FK4 1167 aaKnown RBP19.35■□□□□ 0.69
TSPO-205ENST00000472378 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
TSPO-205ENST00000472378 SYTL5Q8TDW5 730 aaPredicted RBP19.35■□□□□ 0.69
TSPO-205ENST00000472378 PAWRQ96IZ0 340 aaKnown RBP19.35■□□□□ 0.69
TSPO-205ENST00000472378 C11orf49Q9H6J7 331 aa19.35■□□□□ 0.69
TSPO-205ENST00000472378 UPF2Q9HAU5 1272 aaKnown RBP19.35■□□□□ 0.69
TSPO-205ENST00000472378 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
TSPO-205ENST00000472378 TNFAIP2Q03169 654 aa19.34■□□□□ 0.69
TSPO-205ENST00000472378 STXBP2Q15833 593 aa19.34■□□□□ 0.69
TSPO-205ENST00000472378 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
TSPO-205ENST00000472378 RAB11FIP4Q86YS3 637 aa19.34■□□□□ 0.69
TSPO-205ENST00000472378 ZNF274Q96GC6 653 aaPredicted RBP19.34■□□□□ 0.69
TSPO-205ENST00000472378 UPF3BQ9BZI7 483 aaKnown RBP19.34■□□□□ 0.69
TSPO-205ENST00000472378 GLT8D2Q9H1C3 349 aa19.34■□□□□ 0.69
TSPO-205ENST00000472378 Q9Y3F1 56 aa19.34■□□□□ 0.69
TSPO-205ENST00000472378 FRMPD3Q5JV73 1810 aa19.33■□□□□ 0.69
TSPO-205ENST00000472378 EDNRBP24530 442 aa19.33■□□□□ 0.68
TSPO-205ENST00000472378 PCSK9Q8NBP7 692 aaKnown RBP19.33■□□□□ 0.68
TSPO-205ENST00000472378 SMARCC2Q8TAQ2 1214 aa19.33■□□□□ 0.68
TSPO-205ENST00000472378 SCFD2Q8WU76 684 aa19.33■□□□□ 0.68
TSPO-205ENST00000472378 IL17RAQ96F46 866 aa19.33■□□□□ 0.68
TSPO-205ENST00000472378 ALDH8A1Q9H2A2 487 aaPredicted RBP19.33■□□□□ 0.68
TSPO-205ENST00000472378 NR2E3Q9Y5X4 410 aa19.33■□□□□ 0.68
TSPO-205ENST00000472378 NID2Q14112 1375 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 ASTN1O14525 1302 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 NKRFO15226 690 aaKnown RBP eCLIP19.32■□□□□ 0.68
TSPO-205ENST00000472378 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
TSPO-205ENST00000472378 PPP1R18Q6NYC8 613 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 HEATR3Q7Z4Q2 680 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
TSPO-205ENST00000472378 CCDC12Q8WUD4 166 aaPredicted RBP19.32■□□□□ 0.68
TSPO-205ENST00000472378 DPF3Q92784 378 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
TSPO-205ENST00000472378 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 PSTPIP2Q9H939 334 aa19.32■□□□□ 0.68
TSPO-205ENST00000472378 V9GY48 417 aaPredicted RBP19.32■□□□□ 0.68
TSPO-205ENST00000472378 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 PIK3CDO00329 1044 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 CPLX1O14810 134 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 ZEB2O60315 1214 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
TSPO-205ENST00000472378 PDIA3P30101 505 aaKnown RBP19.31■□□□□ 0.68
TSPO-205ENST00000472378 LRRC41Q15345 812 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
TSPO-205ENST00000472378 ANO1Q5XXA6 986 aa19.31■□□□□ 0.68
TSPO-205ENST00000472378 EEPD1Q7L9B9 569 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms