RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 ZSWIM9Q86XI8 627 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 NLGN2Q8NFZ4 835 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 IMPACTQ9P2X3 320 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
CDHR3-208ENST00000471910 PTCH2Q9Y6C5 1203 aa6.91□□□□□ -1.3
CDHR3-208ENST00000471910 C7orf72A4D263 438 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 PSPNO60542 156 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 GLI1P08151 1106 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 CYP4F8P98187 520 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 CYP4F3Q08477 520 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 TESK1Q15569 626 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 RSPO2Q6UXX9 243 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-208ENST00000471910 SP110Q9HB58 689 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 ACSL6Q9UKU0 697 aa6.9□□□□□ -1.3
CDHR3-208ENST00000471910 MRPS23Q9Y3D9 190 aaKnown RBP6.9□□□□□ -1.3
CDHR3-208ENST00000471910 TIMM13Q9Y5L4 95 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-208ENST00000471910 TLDC2A0PJX2 215 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 PNLIPP16233 465 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-208ENST00000471910 ITGB5P18084 799 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 RPL11P62913 178 aaKnown RBP6.89□□□□□ -1.31
CDHR3-208ENST00000471910 FYB2Q5VWT5 728 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 FOXB2Q5VYV0 432 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 NLRX1Q86UT6 975 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 HOMER1Q86YM7 354 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 FAM168AQ92567 244 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 APPBP2Q92624 585 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 C1orf159Q96HA4 380 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 EXOC2Q96KP1 924 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
CDHR3-208ENST00000471910 RNF32Q9H0A6 362 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 SLC6A17Q9H1V8 727 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 PDLIM7Q9NR12 457 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
CDHR3-208ENST00000471910 TMEFF2Q9UIK5 374 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-208ENST00000471910 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 NAT1P18440 290 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 CEBPAP49715 358 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-208ENST00000471910 GABREP78334 506 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 TIGD5Q53EQ6 642 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 CABP7Q86V35 215 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 LZTR1Q8N653 840 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 PLCD4Q9BRC7 762 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
CDHR3-208ENST00000471910 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
CDHR3-208ENST00000471910 AQP7O14520 342 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 PAPLNO95428 1278 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 MVKQ03426 396 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 LSAMPQ13449 338 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 INF2Q27J81 1249 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 DENND5AQ6IQ26 1287 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 MPZL3Q6UWV2 235 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 MAMDC2Q7Z304 686 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-208ENST00000471910 IFNL3Q8IZI9 196 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 SYNPOQ8N3V7 929 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 RCBTB1Q8NDN9 531 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 PTPRN2Q92932 1015 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 KISS1RQ969F8 398 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-208ENST00000471910 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 BTG4Q9NY30 223 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDHR3-208ENST00000471910 GULP1Q9UBP9 304 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 PCDHA2Q9Y5H9 948 aa6.87□□□□□ -1.31
CDHR3-208ENST00000471910 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
CDHR3-208ENST00000471910 BLACEA4D250 179 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 EFCAB14O75071 495 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 CLSTN1O94985 981 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 PDE6BP35913 854 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 SQSTM1Q13501 440 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 BICRALQ6AI39 1079 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 STYK1Q6J9G0 422 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 CCDC103Q8IW40 242 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 SHISA4Q96DD7 197 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 INTS4Q96HW7 963 aaKnown RBP6.86□□□□□ -1.31
CDHR3-208ENST00000471910 RWDD3Q9Y3V2 267 aa6.86□□□□□ -1.31
CDHR3-208ENST00000471910 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 FUCA1P04066 466 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 MPOP05164 745 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 GPR85P60893 370 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 TCEA2Q15560 299 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 NTRK3Q16288 839 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 MBLAC2Q68D91 279 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 CEP68Q76N32 757 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 IRF2BP1Q8IU81 584 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 TRMT2BQ96GJ1 504 aaKnown RBP6.85□□□□□ -1.31
CDHR3-208ENST00000471910 TMEM169Q96HH4 297 aa6.85□□□□□ -1.31
CDHR3-208ENST00000471910 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms