RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 OR14I1A6ND48 311 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 NFE2L2Q16236 605 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 ACBD5Q5T8D3 534 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-221ENST00000471887 TMEM145Q8NBT3 493 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 EPB41L4BQ9H329 900 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 NSUN3Q9H649 340 aaKnown RBP7.88□□□□□ -1.15
HDAC9-221ENST00000471887 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 ARHGEF4Q9NR80 690 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 C7orf72A4D263 438 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-221ENST00000471887 NPHS1O60500 1241 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 FGFR1P11362 822 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 ERVFRD-1P60508 538 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 KCNAB2Q13303 367 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 PPIL6Q8IXY8 311 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 KREMEN2Q8NCW0 462 aa7.87□□□□□ -1.15
HDAC9-221ENST00000471887 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-221ENST00000471887 PRODHO43272 600 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 MPOP05164 745 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 OGFOD2Q6N063 350 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 DIO2Q92813 273 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 C1orf159Q96HA4 380 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 TNFRSF12AQ9NP84 129 aa7.86□□□□□ -1.15
HDAC9-221ENST00000471887 CDK11AQ9UQ88 783 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-221ENST00000471887 KDM2BQ8NHM5 1336 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 DLX3O60479 287 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 DIAPH1O60610 1272 aaKnown RBP7.85□□□□□ -1.15
HDAC9-221ENST00000471887 FARP2O94887 1054 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-221ENST00000471887 SDHBP21912 280 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 TACR1P25103 407 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 TXKP42681 527 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 TESK1Q15569 626 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 MBLAC2Q68D91 279 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 BICRALQ6AI39 1079 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 NSMFQ6X4W1 530 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 ZNF605Q86T29 641 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 FBXO15Q8NCQ5 510 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-221ENST00000471887 DNAJC7Q99615 494 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 ZNF552Q9H707 407 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-221ENST00000471887 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 GULP1Q9UBP9 304 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 TMEFF2Q9UIK5 374 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-221ENST00000471887 RWDD3Q9Y3V2 267 aa7.85□□□□□ -1.15
HDAC9-221ENST00000471887 MYO1BO43795 1136 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 ADCY3O60266 1144 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 PABPC1P11940 636 aaKnown RBP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 TMEM62Q0P6H9 643 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 BMS1Q14692 1282 aaKnown RBP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 INF2Q27J81 1249 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 YOD1Q5VVQ6 348 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 CABP7Q86V35 215 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 CCDC103Q8IW40 242 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 LZTR1Q8N653 840 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 IPO9Q96P70 1041 aaKnown RBP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 CDC6Q99741 560 aa7.84□□□□□ -1.15
HDAC9-221ENST00000471887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDAC9-221ENST00000471887 NUDT19A8MXV4 375 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 HRKO00198 91 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 ABLIM1O14639 778 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 LTBRP36941 435 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 GTF2A2P52657 109 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 RAB3GAP1Q15042 981 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 LONRF2Q1L5Z9 754 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 CCDC144BQ3MJ40 725 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 OLFML2BQ68BL8 750 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 DENND5AQ6IQ26 1287 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 POU5F2Q8N7G0 328 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 USP33Q8TEY7 942 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 OSBP2Q969R2 916 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 MRFAP1L1Q96HT8 127 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 FAM84AQ96KN4 292 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 SLC26A8Q96RN1 970 aa7.83□□□□□ -1.16
HDAC9-221ENST00000471887 TIMM13Q9Y5L4 95 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-221ENST00000471887 ARNTLO00327 626 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 PEX10O60683 326 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 CYBBP04839 570 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 DBHP09172 617 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 RPL11P62913 178 aaKnown RBP7.82□□□□□ -1.16
HDAC9-221ENST00000471887 MESP2Q0VG99 397 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 NR1I3Q14994 352 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 PAQR3Q6TCH7 311 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 USP53Q70EK8 1073 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 SCUBE1Q8IWY4 988 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 SLC38A3Q99624 504 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 MTA3Q9BTC8 594 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 MARCH2Q9P0N8 246 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 NPFFR2Q9Y5X5 522 aa7.82□□□□□ -1.16
HDAC9-221ENST00000471887 TRBV23-1A0A0A0MS06 115 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 PPP1R11O60927 126 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-221ENST00000471887 YBX1P67809 324 aaKnown RBP7.81□□□□□ -1.16
HDAC9-221ENST00000471887 ZC3H12BQ5HYM0 836 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms