RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 B4DLN1 442 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 SH2B2O14492 632 aaPredicted RBP17.19■□□□□ 0.34
SSR4-208ENST00000471880 ZBTB5O15062 677 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 ADCY6O43306 1168 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
SSR4-208ENST00000471880 IRX5P78411 483 aaPredicted RBP17.19■□□□□ 0.34
SSR4-208ENST00000471880 MCF2L2Q86YR7 1114 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 TCEANC2Q96MN5 208 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 PRDM5Q9NQX1 630 aaPredicted RBP17.19■□□□□ 0.34
SSR4-208ENST00000471880 PCDHA1Q9Y5I3 950 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
SSR4-208ENST00000471880 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
SSR4-208ENST00000471880 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
SSR4-208ENST00000471880 DDAH1O94760 285 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 SLC34A2O95436 690 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 RTP1P59025 263 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 TROAPQ12815 778 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
SSR4-208ENST00000471880 KRT32Q14532 448 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 KATNBL1Q9H079 304 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 AP5M1Q9H0R1 490 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 PRKAG2Q9UGJ0 569 aa17.18■□□□□ 0.34
SSR4-208ENST00000471880 MYADML2A6NDP7 307 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 REC8O95072 547 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 GNASQ5JWF2 1037 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 VTA1Q9NP79 307 aa17.17■□□□□ 0.34
SSR4-208ENST00000471880 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
SSR4-208ENST00000471880 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
SSR4-208ENST00000471880 A0A1W2PQ45 241 aaPredicted RBP17.16■□□□□ 0.34
SSR4-208ENST00000471880 A0A1W2PQY0 241 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
SSR4-208ENST00000471880 ADAMTS4O75173 837 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 CALM1P0DP23 149 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 CALM2P0DP24 149 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 CALM3P0DP25 149 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 PTGS1P23219 599 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 ACLYP53396 1101 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 BEX3Q00994 111 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 TRAF1Q13077 416 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 KCNA10Q16322 511 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 TLK2Q86UE8 772 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 CMTR1Q8N1G2 835 aaKnown RBP17.16■□□□□ 0.34
SSR4-208ENST00000471880 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
SSR4-208ENST00000471880 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
SSR4-208ENST00000471880 MTA3Q9BTC8 594 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 STARD7Q9NQZ5 370 aa17.16■□□□□ 0.34
SSR4-208ENST00000471880 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 PLEKHA8P1O95397 391 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 GNAQP50148 359 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 IQSEC1Q6DN90 963 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 PCSK9Q8NBP7 692 aaKnown RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 DNERQ8NFT8 737 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 SYTL5Q8TDW5 730 aaPredicted RBP17.15■□□□□ 0.34
SSR4-208ENST00000471880 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 TAAR1Q96RJ0 339 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 RIOX1Q9H6W3 641 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 PHF24Q9UPV7 400 aa17.15■□□□□ 0.34
SSR4-208ENST00000471880 LAMA3Q16787 3333 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 CYTH3O43739 400 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 PQBP1O60828 265 aaKnown RBP17.14■□□□□ 0.33
SSR4-208ENST00000471880 CPA1P15085 419 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 SMPD1P17405 629 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 LIFRP42702 1097 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 FXR1P51114 621 aaKnown RBP eCLIP17.14■□□□□ 0.33
SSR4-208ENST00000471880 GJA9P57773 515 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
SSR4-208ENST00000471880 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 TAPT1Q6NXT6 567 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 NSUN6Q8TEA1 469 aaKnown RBP17.14■□□□□ 0.33
SSR4-208ENST00000471880 LBHD1Q9BQE6 289 aaPredicted RBP17.14■□□□□ 0.33
SSR4-208ENST00000471880 TSEN34Q9BSV6 310 aaKnown RBP17.14■□□□□ 0.33
SSR4-208ENST00000471880 WDR11Q9BZH6 1224 aa17.14■□□□□ 0.33
SSR4-208ENST00000471880 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 ASGR1P07306 291 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
SSR4-208ENST00000471880 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
SSR4-208ENST00000471880 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 TMEM63BQ5T3F8 832 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 SEPT14Q6ZU15 432 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 OR6J1Q8NGC5 347 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms