RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.2
NF1-208ENST00000471572 COQ6Q9Y2Z9 468 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 XPOTO43592 962 aaKnown RBP7.52□□□□□ -1.21
NF1-208ENST00000471572 GAS7O60861 476 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 ULK1O75385 1050 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 GUCY1A3Q02108 690 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 BIRC3Q13489 604 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 CREB3L3Q68CJ9 461 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 CACTIN-AS1Q8N1I8 211 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 NGDNQ8NEJ9 315 aaKnown RBP7.52□□□□□ -1.21
NF1-208ENST00000471572 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
NF1-208ENST00000471572 DIO2Q92813 273 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 SKA1Q96BD8 255 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 SGCZQ96LD1 299 aa7.52□□□□□ -1.21
NF1-208ENST00000471572 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
NF1-208ENST00000471572 SPDYE3A6NKU9 549 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 AFF1P51825 1210 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 POU4F3Q15319 338 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 ELF2Q15723 593 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 LPIN3Q9BQK8 851 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CRB3Q9BUF7 120 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 NKX2-4Q9H2Z4 354 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 GP6Q9HCN6 339 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 PDZRN3Q9UPQ7 1066 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 WASHC2AQ641Q2 1341 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 RHOBTB3O94955 611 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CFBP00751 764 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CYP11A1P05108 521 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.216e-6■□□□□ 10.9
NF1-208ENST00000471572 ZKSCAN1P17029 563 aaPredicted RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 HSPA6P17066 643 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CASP2P42575 452 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 KCNJ6P48051 423 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 SUGP1Q8IWZ8 645 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 MICALL1Q8N3F8 863 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 ZBTB34Q8NCN2 500 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 CCDC74BQ96LY2 380 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 TEKT5Q96M29 485 aa7.51□□□□□ -1.21
NF1-208ENST00000471572 ACO2Q99798 780 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 MKRN2Q9H000 416 aaKnown RBP7.51□□□□□ -1.21
NF1-208ENST00000471572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.5□□□□□ -1.21
NF1-208ENST00000471572 TRIM75PA6NK02 468 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 CKMP06732 381 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 SNRPB2P08579 225 aaKnown RBP7.5□□□□□ -1.21
NF1-208ENST00000471572 BMP1P13497 986 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 GBP1P32455 592 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
NF1-208ENST00000471572 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 PUM3Q15397 648 aaKnown RBP7.5□□□□□ -1.21
NF1-208ENST00000471572 ZBTB37Q5TC79 503 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
NF1-208ENST00000471572 POMZP3Q6PJE2 187 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 LDHAL6AQ6ZMR3 332 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 SLC41A1Q8IVJ1 513 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 SLC5A5Q92911 643 aa7.5□□□□□ -1.21
NF1-208ENST00000471572 AQP7O14520 342 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 SCG5P05408 212 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 FXR1P51114 621 aaKnown RBP eCLIP7.49□□□□□ -1.21
NF1-208ENST00000471572 MECP2P51608 486 aaKnown RBP7.49□□□□□ -1.21
NF1-208ENST00000471572 SCAND1P57086 179 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 LLGL1Q15334 1064 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 DBN1Q16643 649 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 CATIPQ7Z7H3 387 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 FAM156AQ8NDB6 213 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 EIF2AK1Q9BQI3 630 aaKnown RBP7.49□□□□□ -1.21
NF1-208ENST00000471572 B4GALT6Q9UBX8 382 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 PCDHGB6Q9Y5F9 930 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 EIF4G1Q04637 1599 aaKnown RBP7.49□□□□□ -1.21
NF1-208ENST00000471572 ARVCFO00192 962 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
NF1-208ENST00000471572 SESN3P58005 492 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 FAPQ12884 760 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 DDB1Q16531 1140 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 CCDC93Q567U6 631 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 HYIQ5T013 277 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 JAKMIP3Q5VZ66 844 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 UBE3DQ7Z6J8 389 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
NF1-208ENST00000471572 TRMT13Q9NUP7 481 aaKnown RBP7.49□□□□□ -1.21
NF1-208ENST00000471572 SLC6A14Q9UN76 642 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 MRFAP1Q9Y605 127 aa7.49□□□□□ -1.21
NF1-208ENST00000471572 hCG_1984214I3L0E3 225 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 TGM5O43548 720 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 ZBED1O96006 694 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 TNFAIP3P21580 790 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 ECI1P42126 302 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 KPNA1P52294 538 aaPredicted RBP7.48□□□□□ -1.21
NF1-208ENST00000471572 CABP4P57796 275 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 ZNF445P59923 1031 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 POU5F1Q01860 360 aaKnown RBP7.48□□□□□ -1.21
NF1-208ENST00000471572 PCSK7Q16549 785 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 BROXQ5VW32 411 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 SLC6A19Q695T7 634 aa7.48□□□□□ -1.21
NF1-208ENST00000471572 FAM43BQ6ZT52 329 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms