RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ZEB2O60315 1214 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 CABYRO75952 493 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 APPP05067 770 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 ASGR1P07306 291 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 GJA9P57773 515 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 PDE4BQ07343 736 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 RAB30Q15771 203 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 CCSAPQ6IQ19 270 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-211ENST00000471455 ARMCX2Q7L311 632 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 METTL3Q86U44 580 aaKnown RBP10.85□□□□□ -0.67
CPSF4-211ENST00000471455 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 RAVER2Q9HCJ3 691 aaKnown RBP10.85□□□□□ -0.67
CPSF4-211ENST00000471455 PRDM6Q9NQX0 595 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 ASB14A6NK59 587 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 GSG1L2A8MUP6 293 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 SMIM22K7EJ46 135 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
CPSF4-211ENST00000471455 GPAA1O43292 621 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 BMP3P12645 472 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 STAT2P52630 851 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-211ENST00000471455 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 TKFCQ3LXA3 575 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
CPSF4-211ENST00000471455 FAM160B2Q86V87 743 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.671e-6■■■□□ 15
CPSF4-211ENST00000471455 MTMR4Q9NYA4 1195 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 MSRAQ9UJ68 235 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 RIPK3Q9Y572 518 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 MYH4Q9Y623 1939 aa10.84□□□□□ -0.67
CPSF4-211ENST00000471455 IGKV6D-41A0A0C4DH26 115 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 MYADML2A6NDP7 307 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 CDK7P50613 346 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 NKX3-2P78367 333 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 TNFAIP2Q03169 654 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 SLFN13Q68D06 897 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 CCDC144CPQ8IYA2 1237 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 LRRC47Q8N1G4 583 aaKnown RBP10.83□□□□□ -0.68
CPSF4-211ENST00000471455 AP5M1Q9H0R1 490 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
CPSF4-211ENST00000471455 CHGBP05060 677 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 CSF2RAP15509 400 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 SLC1A4P43007 532 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 TMEM240Q5SV17 173 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 RASIP1Q5U651 963 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 ATXN2LQ8WWM7 1075 aaKnown RBP10.82□□□□□ -0.68
CPSF4-211ENST00000471455 OSBP2Q969R2 916 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 GMCL1Q96IK5 515 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 PBX4Q9BYU1 374 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 NAPBQ9H115 298 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 IL23AQ9NPF7 189 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 RNF146Q9NTX7 359 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 NCOR1O75376 2440 aa10.82□□□□□ -0.68
CPSF4-211ENST00000471455 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
CPSF4-211ENST00000471455 TMEM232C9JQI7 657 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 TNFRSF10AO00220 468 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 ERC2O15083 957 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 PRDM1O75626 825 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 FSCN1Q16658 493 aaKnown RBP10.81□□□□□ -0.68
CPSF4-211ENST00000471455 ZNF365Q70YC5 407 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 STAG1Q8WVM7 1258 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 HERVK_113Q902F9 699 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 FGD4Q96M96 766 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 HIPK3Q9H422 1215 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 SLC28A3Q9HAS3 691 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 EPB41L4AQ9HCS5 686 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-211ENST00000471455 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 Q9Y3F1 56 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 MYO9BQ13459 2157 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 MCM3APO60318 1980 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 TTC41PQ6P2S7 1318 aa10.81□□□□□ -0.68
CPSF4-211ENST00000471455 LAMA2P24043 3122 aaKnown RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 SMARCA5O60264 1052 aaPredicted RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 PLA2G6O60733 806 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 CD4P01730 458 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 FGBP02675 491 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 PFKMP08237 780 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 TFAP4Q01664 338 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 ITGA7Q13683 1181 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms