RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 SEPHS1P49903 392 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 MBLAC2Q68D91 279 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 TMEM151BQ8IW70 566 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 GMLQ99445 158 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 MMP19Q99542 508 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 APBA2Q99767 749 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 NKX2-4Q9H2Z4 354 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 PRKAG3Q9UGI9 489 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 AKT3Q9Y243 479 aa5.24□□□□□ -1.57
COPS3-206ENST00000471414 TRBV23OR9-2A0A075B6M9 112 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 C7orf72A4D263 438 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 NAT2P11245 290 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 PAMP19021 973 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 ETFBP38117 255 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 ZNF200P98182 395 aaPredicted RBP5.23□□□□□ -1.57
COPS3-206ENST00000471414 TESK1Q15569 626 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 TCERG1LQ5VWI1 586 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 BICRALQ6AI39 1079 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 MRM1Q6IN84 353 aaKnown RBP5.23□□□□□ -1.57
COPS3-206ENST00000471414 POMZP3Q6PJE2 187 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 C6orf15Q6UXA7 325 aaPredicted RBP5.23□□□□□ -1.57
COPS3-206ENST00000471414 MCF2L2Q86YR7 1114 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 FAM178BQ8IXR5 827 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 MARCH10Q8NA82 808 aaPredicted RBP5.23□□□□□ -1.57
COPS3-206ENST00000471414 NETO2Q8NC67 525 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 MICAL1Q8TDZ2 1067 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 TSPAN17Q96FV3 270 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 ACTR10Q9NZ32 417 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 MRVI1Q9Y6F6 885 aa5.23□□□□□ -1.57
COPS3-206ENST00000471414 NPHP3-ACAD11A0A0J9YXS1 232 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 A0A1W2PQ27 194 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 A0A1W2PQ64 194 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 A0A1W2PQC6 194 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 A0A1W2PQD8 194 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 ARNTLO00327 626 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 TBX1O43435 398 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 BUB1BO60566 1050 aaPredicted RBP5.22□□□□□ -1.57
COPS3-206ENST00000471414 KCNH1O95259 989 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 SCG5P05408 212 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 INHBBP09529 407 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 ATF2P15336 505 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 TACR1P25103 407 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 HTRA3P83110 453 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 PRR5P85299 388 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 GTF2IRD2BQ6EKJ0 949 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 GTF2IRD2Q86UP8 949 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 VPS37DQ86XT2 251 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 Q8N1Y9 231 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 CRACR2BQ8N4Y2 399 aaPredicted RBP5.22□□□□□ -1.57
COPS3-206ENST00000471414 SLC43A3Q8NBI5 491 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 NPLOC4Q8TAT6 608 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 FRS2Q8WU20 508 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 DPF3Q92784 378 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 LGR4Q9BXB1 951 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 ZNF408Q9H9D4 720 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 PARD6AQ9NPB6 346 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.22□□□□□ -1.573e-6■□□□□ 9.2
COPS3-206ENST00000471414 SUGT1Q9Y2Z0 365 aa5.22□□□□□ -1.57
COPS3-206ENST00000471414 B2RBV5 119 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 F8W031 263 aaPredicted RBP5.21□□□□□ -1.58
COPS3-206ENST00000471414 SUSD5O60279 629 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 THBDP07204 575 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 PLS3P13797 630 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 HOXA5P20719 270 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 AFF3P51826 1226 aaKnown RBP5.21□□□□□ -1.58
COPS3-206ENST00000471414 NCKAP1LP55160 1127 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 RBM10P98175 930 aaKnown RBP5.21□□□□□ -1.58
COPS3-206ENST00000471414 SCRN1Q12765 414 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 CNKSR3Q6P9H4 555 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 LZTR1Q8N653 840 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 TP53I13Q8NBR0 393 aaPredicted RBP5.21□□□□□ -1.58
COPS3-206ENST00000471414 PLEKHO2Q8TD55 490 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 C20orf173Q96LM9 149 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.21□□□□□ -1.58
COPS3-206ENST00000471414 GULP1Q9UBP9 304 aa5.21□□□□□ -1.58
COPS3-206ENST00000471414 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
COPS3-206ENST00000471414 FFAR3O14843 346 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
COPS3-206ENST00000471414 ITGAVP06756 1048 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 ASGR2P07307 311 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 DLX2Q07687 328 aaPredicted RBP5.2□□□□□ -1.58
COPS3-206ENST00000471414 GNL2Q13823 731 aaKnown RBP5.2□□□□□ -1.58
COPS3-206ENST00000471414 TARBP2Q15633 366 aaKnown RBP5.2□□□□□ -1.58
COPS3-206ENST00000471414 VWA3BQ502W6 1294 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 LILRA6Q6PI73 481 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 CCDC103Q8IW40 242 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 LINC01356Q8N9X3 169 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 KREMEN2Q8NCW0 462 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 CPA5Q8WXQ8 436 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 XYLT2Q9H1B5 865 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 GPRC5CQ9NQ84 441 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 CLEC1BQ9P126 229 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 RWDD3Q9Y3V2 267 aa5.2□□□□□ -1.58
COPS3-206ENST00000471414 A0A0G2JLL6 359 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms