RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 PPP4R3AQ6IN85 833 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 ATG4CQ96DT6 458 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
LINC00880-201ENST00000471357 TMEM60Q9H2L4 133 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 ZNF408Q9H9D4 720 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
LINC00880-201ENST00000471357 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
LINC00880-201ENST00000471357 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
LINC00880-201ENST00000471357 CXCL11O14625 94 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 CFBP00751 764 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 PRPHP41219 470 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 LDLRAD1Q5T700 205 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 SMCHD1A6NHR9 2005 aa13.58□□□□□ -0.24
LINC00880-201ENST00000471357 OR52Z1P0C646 297 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 USP11P51784 963 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 PPIL2Q13356 520 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 IL17AQ16552 155 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 TBC1D5Q92609 795 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 TIGD1Q96MW7 591 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 ADAMTS5Q9UNA0 930 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 UNCXA6NJT0 531 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 TDP2O95551 362 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 ALAS1P13196 640 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 PROCA1Q8NCQ7 364 aaPredicted RBP13.57□□□□□ -0.24
LINC00880-201ENST00000471357 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 KCNH4Q9UQ05 1017 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
LINC00880-201ENST00000471357 SREBF1P36956 1147 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 OAZ1P54368 228 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 SYMPKQ92797 1274 aaKnown RBP13.56□□□□□ -0.24
LINC00880-201ENST00000471357 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 NMRK2Q9NPI5 230 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 SLC37A4O43826 429 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 FKBP1BP68106 108 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 ARHGAP4P98171 946 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 CALCRLQ16602 461 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 TREML2Q5T2D2 321 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 MOXD1Q6UVY6 613 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 REPS2Q8NFH8 660 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 CRYGNQ8WXF5 182 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 CLEC4DQ8WXI8 215 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 MTMR9Q96QG7 549 aa13.56□□□□□ -0.24
LINC00880-201ENST00000471357 DDX25Q9UHL0 483 aaKnown RBP13.56□□□□□ -0.24
LINC00880-201ENST00000471357 CYP3A7-CYP3A51PA0A087WV96 503 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
LINC00880-201ENST00000471357 CYP3A7P24462 503 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
LINC00880-201ENST00000471357 LONRF3Q496Y0 759 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 ZNF526Q8TF50 670 aaPredicted RBP13.55□□□□□ -0.24
LINC00880-201ENST00000471357 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 EHMT1Q9H9B1 1298 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 PARP14Q460N5 1801 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 MYH7BA7E2Y1 1941 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 RLFQ13129 1914 aa13.55□□□□□ -0.24
LINC00880-201ENST00000471357 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
LINC00880-201ENST00000471357 NFIBO00712 420 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 CCDC192P0DO97 292 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 HSD17B4P51659 736 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 GHRHRQ02643 423 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 PDILTQ8N807 584 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 AK8Q96MA6 479 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
LINC00880-201ENST00000471357 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 MAP3K20Q9NYL2 800 aaKnown RBP13.54□□□□□ -0.24
LINC00880-201ENST00000471357 ZNF214Q9UL59 606 aaPredicted RBP13.54□□□□□ -0.24
LINC00880-201ENST00000471357 PTPRFP10586 1907 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 ATP2A1O14983 1001 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 CYP3A4P08684 503 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 TXLNAP40222 546 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 TXKP42681 527 aa13.54□□□□□ -0.24
LINC00880-201ENST00000471357 TMEM132BQ14DG7 1078 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms