RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 MYH6P13533 1939 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 DYNC1LI2O43237 492 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-203ENST00000471344 CDK7P50613 346 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 NKX3-2P78367 333 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 FSCN1Q16658 493 aaKnown RBP17.96■□□□□ 0.47
COL1A1-203ENST00000471344 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
COL1A1-203ENST00000471344 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 VTI1AQ96AJ9 217 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
COL1A1-203ENST00000471344 ELP1O95163 1332 aa17.96■□□□□ 0.46
COL1A1-203ENST00000471344 PARP1P09874 1014 aaKnown RBP17.95■□□□□ 0.46
COL1A1-203ENST00000471344 RAG1P15918 1043 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 NT5C2P49902 561 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 SLC35G1Q2M3R5 365 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 VAT1LQ9HCJ6 419 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 COL20A1Q9P218 1284 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
COL1A1-203ENST00000471344 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 GRIN2DO15399 1336 aa17.95■□□□□ 0.46
COL1A1-203ENST00000471344 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
COL1A1-203ENST00000471344 DCDC2CA8MYV0 355 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 ARVCFO00192 962 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
COL1A1-203ENST00000471344 EDNRBP24530 442 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 PSMC6P62333 389 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
COL1A1-203ENST00000471344 IQSEC1Q6DN90 963 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 AP5M1Q9H0R1 490 aa17.94■□□□□ 0.46
COL1A1-203ENST00000471344 E7EWF7 191 aa17.93■□□□□ 0.46
COL1A1-203ENST00000471344 PPP1R11O60927 126 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-203ENST00000471344 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
COL1A1-203ENST00000471344 COPS5Q92905 334 aa17.93■□□□□ 0.46
COL1A1-203ENST00000471344 WDR11Q9BZH6 1224 aa17.93■□□□□ 0.46
COL1A1-203ENST00000471344 MAD2L2Q9UI95 211 aa17.93■□□□□ 0.46
COL1A1-203ENST00000471344 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-203ENST00000471344 OPLAHO14841 1288 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 ANTXR2P58335 489 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 PDE4DQ08499 809 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 PPP1R13LQ8WUF5 828 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 TAAR1Q96RJ0 339 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 MTMR10Q9NXD2 777 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 RBM8AQ9Y5S9 174 aaKnown RBP17.92■□□□□ 0.46
COL1A1-203ENST00000471344 ABCB11O95342 1321 aa17.92■□□□□ 0.46
COL1A1-203ENST00000471344 RBM47A0AV96 593 aaKnown RBP17.91■□□□□ 0.46
COL1A1-203ENST00000471344 KLRF2D3W0D1 207 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
COL1A1-203ENST00000471344 ARIH2O95376 493 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 FPGSQ05932 587 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 TRDNQ13061 729 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 FBXO11Q86XK2 927 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 SLC43A3Q8NBI5 491 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 DNERQ8NFT8 737 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 SYTL5Q8TDW5 730 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-203ENST00000471344 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 PPP1R12CQ9BZL4 782 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-203ENST00000471344 PNMA2Q9UL42 364 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
COL1A1-203ENST00000471344 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 PALM3A6NDB9 673 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-203ENST00000471344 TIMP1P01033 207 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 CD4P01730 458 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 OR6J1Q8NGC5 347 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 TRPV6Q9H1D0 765 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 Q9Y3F1 56 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 UMODL1Q5DID0 1318 aa17.9■□□□□ 0.46
COL1A1-203ENST00000471344 A0A0C4DFX4 3053 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 LOC102724159A0A0B4J2E5 919 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 GRM4Q14833 912 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 PPP2R5BQ15173 497 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 PWP2Q15269 919 aaKnown RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 MB21D2Q8IYB1 491 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 MTMR8Q96EF0 704 aa17.89■□□□□ 0.45
COL1A1-203ENST00000471344 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 LSG1Q9H089 658 aaKnown RBP17.89■□□□□ 0.45
COL1A1-203ENST00000471344 CYTH3O43739 400 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 B4GALT4O60513 344 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 MYL3P08590 195 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 CSF2RAP15509 400 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 CYP2C18P33260 490 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 WTAPQ15007 396 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 GUCD1Q96NT3 240 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms