RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PLEKHN1Q494U1 663 aaPredicted RBP8.94□□□□□ -0.98
CCDC39-202ENST00000471307 BICRALQ6AI39 1079 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 CABP7Q86V35 215 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 MZB1Q8WU39 189 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 EPN3Q9H201 632 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 CYP26B1Q9NR63 512 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 IRAK3Q9Y616 596 aa8.94□□□□□ -0.98
CCDC39-202ENST00000471307 FBLN7Q53RD9 439 aa8.93□□□□□ -0.98
CCDC39-202ENST00000471307 TMEM151BQ8IW70 566 aa8.93□□□□□ -0.98
CCDC39-202ENST00000471307 MMP19Q99542 508 aa8.93□□□□□ -0.98
CCDC39-202ENST00000471307 NKX2-4Q9H2Z4 354 aa8.93□□□□□ -0.98
CCDC39-202ENST00000471307 KCTD3Q9Y597 815 aa8.93□□□□□ -0.98
CCDC39-202ENST00000471307 IRS4O14654 1257 aaPredicted RBP8.92□□□□□ -0.98
CCDC39-202ENST00000471307 SUSD5O60279 629 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 DDAH1O94760 285 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 CDR1P51861 262 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 GTF2IRD2BQ6EKJ0 949 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 LCNL1Q6ZST4 164 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 GTF2IRD2Q86UP8 949 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 LDHDQ86WU2 507 aa8.92□□□□□ -0.98
CCDC39-202ENST00000471307 R3HCC1Q9Y3T6 440 aaKnown RBP8.92□□□□□ -0.98
CCDC39-202ENST00000471307 IRS2Q9Y4H2 1338 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 GLI4P10075 376 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 EPHB3P54753 998 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 SCRN1Q12765 414 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 EEPD1Q7L9B9 569 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 PPP1R14AQ96A00 147 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC39-202ENST00000471307 PCDHA5Q9Y5H7 936 aa8.91□□□□□ -0.98
CCDC39-202ENST00000471307 HOXC12P31275 282 aa8.9□□□□□ -0.98
CCDC39-202ENST00000471307 SV2CQ496J9 727 aa8.9□□□□□ -0.98
CCDC39-202ENST00000471307 CPNE8Q86YQ8 564 aa8.9□□□□□ -0.98
CCDC39-202ENST00000471307 NETO2Q8NC67 525 aa8.9□□□□□ -0.98
CCDC39-202ENST00000471307 NPHS1O60500 1241 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 PLS3P13797 630 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 ZC3H6P61129 1189 aaKnown RBP8.89□□□□□ -0.99
CCDC39-202ENST00000471307 SSPNQ14714 243 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 TARBP2Q15633 366 aaKnown RBP8.89□□□□□ -0.99
CCDC39-202ENST00000471307 E4F1Q66K89 784 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-202ENST00000471307 IQCEQ6IPM2 695 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 ZNF227Q86WZ6 799 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 IRF2BPLQ9H1B7 796 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 LRP2BPQ9P2M1 347 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 NUDT5Q9UKK9 219 aa8.89□□□□□ -0.99
CCDC39-202ENST00000471307 C7orf72A4D263 438 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 B2RBV5 119 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 SCG5P05408 212 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 ITGAVP06756 1048 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 THBDP07204 575 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 PFKLP17858 780 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 TACR1P25103 407 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 TCERG1LQ5VWI1 586 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
CCDC39-202ENST00000471307 IGDCC3Q8IVU1 814 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 MTA3Q9BTC8 594 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 RNF38Q9H0F5 515 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 CLEC1BQ9P126 229 aa8.88□□□□□ -0.99
CCDC39-202ENST00000471307 DBR1Q9UK59 544 aaKnown RBP8.88□□□□□ -0.99
CCDC39-202ENST00000471307 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
CCDC39-202ENST00000471307 AGRPO00253 132 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 GJB6O95452 261 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 CPP00450 1065 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 PI3P19957 117 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 SLC9A5Q14940 896 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 MICAL1Q8TDZ2 1067 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 PEX11GQ96HA9 241 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 GULP1Q9UBP9 304 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
CCDC39-202ENST00000471307 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
CCDC39-202ENST00000471307 ZNF200P98182 395 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-202ENST00000471307 ANKS3Q6ZW76 656 aa8.86□□□□□ -0.99
CCDC39-202ENST00000471307 NPLOC4Q8TAT6 608 aa8.86□□□□□ -0.99
CCDC39-202ENST00000471307 BTN2A2Q8WVV5 523 aa8.86□□□□□ -0.99
CCDC39-202ENST00000471307 DACT3Q96B18 629 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-202ENST00000471307 TSPAN17Q96FV3 270 aa8.86□□□□□ -0.99
CCDC39-202ENST00000471307 BUB1BO60566 1050 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-202ENST00000471307 ZBTB7AO95365 584 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 FBLN1P23142 703 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 IGFBP6P24592 240 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-202ENST00000471307 PRR5P85299 388 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 CAP1Q01518 475 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 TESK1Q15569 626 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 DDR2Q16832 855 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-202ENST00000471307 FAM129CQ86XR2 697 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 TMEFF1Q8IYR6 380 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 USP33Q8TEY7 942 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 FRS2Q8WU20 508 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 HNRNPLLQ8WVV9 542 aaKnown RBP8.85□□□□□ -0.99
CCDC39-202ENST00000471307 EPB41L4AQ9HCS5 686 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-202ENST00000471307 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
CCDC39-202ENST00000471307 ZC3H12DA2A288 527 aaKnown RBP8.84□□□□□ -0.99
CCDC39-202ENST00000471307 KLF4O43474 513 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 PPP1R11O60927 126 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-202ENST00000471307 CYP4F3Q08477 520 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 KCNAB2Q13303 367 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 SLC10A6Q3KNW5 377 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms