RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RBM47A0AV96 593 aaKnown RBP15.75■□□□□ 0.11
HMGN1-211ENST00000471260 CTAGE5O15320 804 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 PQBP1O60828 265 aaKnown RBP15.75■□□□□ 0.11
HMGN1-211ENST00000471260 CYP21A2P08686 494 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 SMPD1P17405 629 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 SEC23AQ15436 765 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 SH3RF1Q7Z6J0 888 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 BADQ92934 168 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 TMEM39AQ9NV64 488 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 LTBP2Q14767 1821 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 ERICH2A1L162 156 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 ARVCFO00192 962 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 RAG1P15918 1043 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 EDNRBP24530 442 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 CALML3P27482 149 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 PTH1RQ03431 593 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 FAAP100Q0VG06 881 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 DUSP28Q4G0W2 176 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 KIAA1211Q6ZU35 1233 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 CENPQQ7L2Z9 268 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 EEPD1Q7L9B9 569 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 RALYLQ86SE5 291 aaKnown RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 MCF2L2Q86YR7 1114 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 FBXO16Q8IX29 292 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 NCOA7Q8NI08 942 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 PURBQ96QR8 312 aaKnown RBP15.74■□□□□ 0.11
HMGN1-211ENST00000471260 PDGFCQ9NRA1 345 aa15.74■□□□□ 0.11
HMGN1-211ENST00000471260 LCTP09848 1927 aa15.73■□□□□ 0.11
HMGN1-211ENST00000471260 NKRFO15226 690 aaKnown RBP eCLIP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 TLR3O15455 904 aaKnown RBP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 DYNC1LI2O43237 492 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 IRX5P78411 483 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 USH1GQ495M9 461 aa15.73■□□□□ 0.11
HMGN1-211ENST00000471260 CYB5R4Q7L1T6 521 aa15.73■□□□□ 0.11
HMGN1-211ENST00000471260 FBXO11Q86XK2 927 aa15.73■□□□□ 0.11
HMGN1-211ENST00000471260 IPO9Q96P70 1041 aaKnown RBP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 WDR11Q9BZH6 1224 aa15.73■□□□□ 0.11
HMGN1-211ENST00000471260 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
HMGN1-211ENST00000471260 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 E7EWF7 191 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 IFIT3O14879 490 aaKnown RBP15.72■□□□□ 0.11
HMGN1-211ENST00000471260 BEX3Q00994 111 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 PDE4DQ08499 809 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 TRAF1Q13077 416 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 QRICH1Q2TAL8 776 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 FAM109BQ6ICB4 259 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-211ENST00000471260 SAMD3Q8N6K7 520 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 SLC43A3Q8NBI5 491 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 MTA3Q9BTC8 594 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 JMJD4Q9H9V9 463 aa15.72■□□□□ 0.11
HMGN1-211ENST00000471260 MAP3K20Q9NYL2 800 aaKnown RBP15.72■□□□□ 0.11
HMGN1-211ENST00000471260 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 PALM3A6NDB9 673 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-211ENST00000471260 DHX16O60231 1041 aaKnown RBP15.71■□□□□ 0.11
HMGN1-211ENST00000471260 TIMP1P01033 207 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 ITGB8P26012 769 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 CPT1AP50416 773 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 SHHQ15465 462 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 CXCL17Q6UXB2 119 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 FAM126BQ8IXS8 530 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 NSUN6Q8TEA1 469 aaKnown RBP15.71■□□□□ 0.11
HMGN1-211ENST00000471260 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 MTMR8Q96EF0 704 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 IWS1Q96ST2 819 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 TBX21Q9UL17 535 aa15.71■□□□□ 0.11
HMGN1-211ENST00000471260 DDX49Q9Y6V7 483 aaKnown RBP15.71■□□□□ 0.11
HMGN1-211ENST00000471260 CD4P01730 458 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 GHRHRQ02643 423 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 FPGSQ05932 587 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 ITGA7Q13683 1181 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 WTAPQ15007 396 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-211ENST00000471260 STAG2Q8N3U4 1231 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 DEFB123Q8N688 67 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
HMGN1-211ENST00000471260 ZBTB5O15062 677 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 KPNA6O60684 536 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 GRM4Q14833 912 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 MFSD5Q6N075 450 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 SYTL5Q8TDW5 730 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-211ENST00000471260 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
HMGN1-211ENST00000471260 RBM8AQ9Y5S9 174 aaKnown RBP15.69■□□□□ 0.1
HMGN1-211ENST00000471260 SMAD3P84022 425 aaKnown RBP15.68■□□□□ 0.1
HMGN1-211ENST00000471260 TROAPQ12815 778 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 STXBP2Q15833 593 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 C9orf50Q5SZB4 431 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms